Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|428209784\|ref\|YP_007094137.1\|	5.00E-85	ATP-dependent Clp protease proteolytic subunit ClpP [Chroococcidiopsis thermalis PCC 7203]
KOG	KOG0840	1.00E-148	ATP-dependent Clp protease, proteolytic subunit
nr	gi\|672177166\|ref\|XP_008808669.1\|	3.00E-162	PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9S834\|CLPP5_ARATH	4.00E-149	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic (Precursor)
trEMBL	tr\|M0TSN5\|M0TSN5_MUSAM	7.00E-157	ATP-dependent Clp protease proteolytic subunit {ECO:0000256\|RuleBase:RU003567}
TAIR	AT1G02560	1.00E-148	nuclear encoded CLP protease 5

Scaffold	Start	End	Strand
GWHAAEX00000030	1977394	1997021	+

Transcript Sequence
>GWHTAAEX009474 ATGCGATTTTTTACAGTTTAATTAATCCAGGGGAAAATCGTATGAAGTGAACGAGCAGAATAGAAGAAAGAGAGAGCGATGGTGGCACTCTCCCTGGCTCTGACAGCGATGGCTTCCTCCTCGCCGGCGGCTTCTCCGCTTCGCACATTCTGCATCACTGCAAACTGTCACAAAACTCTCGTCCTCTCCCCCTTTCCTTCTTTCTCCCTCAAGAATCGCCGGAAGCTATCAGGAAGTTGGAGCTTACCTACCGCCGTTTACTCAAATGGCGGCGGCTGTGTTACGGACCGCGCTAGCAGACGAGGTTTTTGGTCAATCAGGGATGATTTGATAGCACCATCGTCTCCTTACATACCGGTGGAGGCGCAGGGTGGTCAAGGTCCACCGCCGATGGTGCAGGAAAGGTTCCAGAGTGTGATTAGCCAGCTGTTCCAGCATAGAATAATAAGATGTGGTGGAGCAGTTGATGATGATATGGCAAACGTTATCGTTGCGCAACTTCTATATCTTGATGCTATCGATCCTAACAAGGATATTATCATGTATGTGAACTCGCCAGGAGGATCTGTAACTGCTGGTATGGCCATCTTTGATACGATGAGGCATATCCGTCCTGATGTTTCTACTGTTTGTGTTGGATTAGCAGCAAGTATGGGTGCTTTCATTCTAAGTTCAGGCACCAAAGGAAAACGCTATAGTTTACCAAATTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGCGCAGGGAGGGCAGACAGATATTGAAATACAGGCAAATGAGATGTTGCATCATAAGGCTACGCTGAACGGGTATCTATCATATCATACAGGTCAGAGCCTTGAGCAGATCAACCAAGACACTGATCGGGACTTCTTCATGAGCGCGAAAGAGGCCAAAGATTATGGTCTGATTGATGGAGTTATTATGAATCCATTGAAAGCTCTCAAGCCACTGCCAGTTTTATTAGATCAAGAAGGAAAACTTCCATCAGTCAGCTAGCTGTATCTTCCAATCAGATATGTTTTACCATGTCGATGTTCTCAATGCTTCTTTTGAGTATCGGTAAAATCTCTGTTTTTCAGGTACGAGAGTTGTATCAATATTTCTATGTTTCACTAGTTAAAGAGTTGTCTGCTAGCTAAATGAATAGGGAAAAGTTCATACTTACCACTCAAATCTTCATTCATTATTGGTTAACGAAATTTTTATGATTATGTGATAATTATGTAAAAATTCAATTTTAAATGTTAAATATGCAACAATTAGATTACGGCACATTGTGTGCTGATTCTGCTTTTATAGGGTGCAGTAAATGAATTAATTATGTTGTGGTAGCCTTTGGTTTTATTTACTTTATC

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K01358	clpP, CLPP	Cell cycle - Caulobacter	map04112
K01358	clpP, CLPP	Longevity regulating pathway - worm	map04212

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.880
SRP064423	SRR2545915	Juvenile tuber	28.380
SRP108465	SRR5643513	five period of Gastrodia elata	34.930
	SRR5643514	five period of Gastrodia elata	34.800
	SRR5643515	five period of Gastrodia elata	35.420
	SRR5643524	five period of Gastrodia elata	33.570
	SRR5643525	five period of Gastrodia elata	35.920
	SRR5643528	five period of Gastrodia elata	36.200
	SRR5643658	five period of Gastrodia elata	32.030
	SRR5643659	five period of Gastrodia elata	36.990
	SRR5643660	five period of Gastrodia elata	35.320
	SRR5643661	five period of Gastrodia elata	37.690
	SRR5643662	five period of Gastrodia elata	45.240
	SRR5643663	five period of Gastrodia elata	45.140
	SRR5643664	five period of Gastrodia elata	37.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	35.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.340
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.170
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.270
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.660
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.660
SRP279888	Gastro	Gastrodia elata tuber	42.36
	Juven	Juvenile tuber	35.01
	Mother_Gastro	Mother tuber of Gastrodia elata	31.45
	Mother_Juven	Mother tuber of Juvenile	35.35