Gene detail

Detail information of GWHGAAEX009475/evm.TU.scaffold_25.58

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|428780585\|ref\|YP_007172371.1\|	2.00E-166	AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina PCC 8305]
KOG	KOG1256	0	Long-chain acyl-CoA synthetases (AMP-forming)
nr	gi\|672141637\|ref\|XP_008794653.1\|	0	PREDICTED: LOW QUALITY PROTEIN: probable acyl-activating enzyme 16, chloroplastic [Phoenix dactylifera]
Swissprot	tr\|Q9LK39\|AAE16_ARATH	0	Probable acyl-activating enzyme 16, chloroplastic (Precursor)
trEMBL	tr\|K4AJ94\|K4AJ94_SETIT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si038959m}
TAIR	AT4G14070	0	acyl-activating enzyme 15

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000030	2027596	2133905	-

Transcript Sequence
>GWHTAAEX009475 GGATAATGTAAAGCTGCAGTGATGCTGTCTGTATCCGATTTGGCCAAGCCTTAAAAAAAGAGATAAATGGAGCATAGCAAAATCTCACGTTGGAGACGACGCCAGTGATCAGCACATGACAGTCCGCTCCCATTCTACGCCCGTGACTTCTTTCTTCGATCGTCCAGCCGTTTCTGCAATTGTCCCTGCGCGGGGTTTTTATTGGAAATTCCGCTCAGTTGCCGTGCATAGTAACCGGATTTGGAGACCTAGGTTTTTCGCCAGCTTGGAGGTGGGCCGTGCATTAAGAAGGAAATACTCACCATTATTGGATGCAGAATTATTCTCAAATGCTAATGTTTTATCCTCAAATGAGTGGAGGGCAGTTCCAGATATTTGGAAATCGGCAGCAGAAAAATATGGGCATCGAACAGCTTTGGTGGATCCCTATCATGATCCTCCAATGGAGCTAACTTACAAACAGCTTGAGCAGGATATTTTAGATTTTTCTGAAGGTTTAAGAGTTGTTGGTCTTCTTCCAAATGAGAAGATTGCACTGTTTGCTGACAATTCATGTAGGTGGCTTGTTGCAGATCAAGGTACCATGGCTACTGGTGCTATTAATGTTGTTAGAGGGACAAGGTCATCTATTGAAGAACTGCTAACAATTTATAACCATTCAGACAGCATTGCTCTTGCTGTCGACAATCCAGAATTTTTCAACAGGATCGCTGAATGCTTGATCCTAAAGGCAGAAATAAGGTTTTTAATTTTACTTTGGGGTGAGAAGTCATCTCTCAGCAGCGAATACACAAAGAATGTTCCATTATATGATTACAAGGATATAATTAAACTAGGTCATGAAAGCCGCCATTCATTGTTGAGTTCTTGCAAAAGAGGTGAATTTAATGCCATTGAACCCATTAAACCTGATGATATTGCAACACTAATGTATACAAGTGGAACAAATGGTATGCCTAAAGGTGTAATGCTTTCACATCGAAATCTCTTGCATCAGATAAAGAACCTGAGAAAGGTCGTACCTACTGTAACTGGAGATAGGTTCTTAAGCATGCTTCCATCATGGCATGCTTATGAGCGTGCTGCTGAGTACTTTTCACTTACCTATGGGATAGAGCAGGTTTACACAAATTTGAAAAAATTGAAGGAAGATTTGAAGCGGTATCAGCCTCAATATCTTATTTCTGTTCCTCTTGTTTATGAAACACTCTATAGTTCTATCTATAAACAAATATCATCAAGCTCTGGTTCTCGCAAGTTTGTTGCGCTATTGCTTATCAAGATCAGTCTTCTATACATGGACACAAAGAGGATTTATGAGGGCAAAGTAATTAAGAAGAAAAATCAACCGTTACCTGTTGTGGTTCAATTCTGCTATTTGTGGGGAAGAGTTGTTGCTGCGATTTTGTGGCCTTTCCATATCTTGGGGATGAAGCTAATATATAGCAAAATTCACTCATCAATCGGAATCTCGAAAGCTGGTATAAGTGGCGGCGGGAGTTTGCCATTGCATATTGACAAATTTTTTGAGGCTATTGGCGTGAAGTTGCAAAATGGTTATGGTCTTACCGAAACATCCCCTGTGATTACTTGTAGATGGCCTGACAACAATGTTCTTGGAACTGTTGGCCACCCAATTAATTTAACAGAAATCTTGATCGTGGATATAGAAACTGGCAGTCCTCTTTCAGATGGTTCAAAAGGCATAATCAAAGTTAGAGGACCGCAGGTCATGAAGGGATACTACAAGAATGCATCAGCTACGAAAGAAGCTATAGATGAAGATGGATGGTTTAACACAGGTGATATAGGCTGGATTGTGCCTAAATATTCTTCTGGGATGAGTAGTCAATGTGGAGGTTTGCTTGTTCTTGAAGGACGTGCAAAAGATACGATTGTTCTTAGAACAGGTGAAAATGTGGAACCATCAGAAATTGAAGAAGCAGCCATGAGAAGTAAATTAATTAAACAGATAGTGGTCATTGGTCAGGATCAGCGCAGGCTTGGAGCTTTAGTTGTCCCAAATATGGATGAGGTTATAGCGGCTGCTAAGAATCGCTTGGCATTCAATGATGAGAATTCTGAGCTCAGCCACGGCAAAATCCTTGACCTGTTATACGAAGAAGTAAGAAAATGGACTGCAGATTGTTCCTTCCATGTTGGACCTATAATGATTGTTGAGGAGCCATTCACGGTAGAAAATGAATTGTTGACCCCAACAATGAAAGTGAGGAGGAGCCAAGTGATTGATCGCTACAGTGCTGAGATTGCGAACTTATTCAAGTGATAAGTGTGCCTGTGAGCTACAATATGATGCAAATGTGCGCTGATGGAATTTGAATTCAATACCTATGATAACAATTCTTGAGCCTCAACTAGTTGAATTGTTGGCATGTCAATAGTTAATTTTATTAGTTACATTTTTGCCCTGCAAGGCTTAACGTCAAAATACAAAAAAGAAGTTTGGGTTTAGATATGAAATTACTGAACATTTGAGTGTTTTTGCGAGTTACATCTCTCTTATCATTAGGCTGCTTGTTACTTGTAATTGTCTTGTCAAATGATGGCTTGAAATAAGAATTGGCTGTTCTTTGGATTTGAG

Network for GWHGAAEX009475

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00501.27	AMP-binding	90	597	3.70E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01897	ACSL, fadD	Metabolic pathways	map01100
		Fatty acid metabolism	map01212
		Fatty acid biosynthesis	map00061
		Fatty acid degradation	map00071
		Peroxisome	map04146
		Ferroptosis	map04216
		Quorum sensing	map02024
		Adipocytokine signaling pathway	map04920
		PPAR signaling pathway	map03320
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.700
SRP064423	SRR2545915	Juvenile tuber	25.960
SRP108465	SRR5643513	five period of Gastrodia elata	14.450
	SRR5643514	five period of Gastrodia elata	9.320
	SRR5643515	five period of Gastrodia elata	11.630
	SRR5643524	five period of Gastrodia elata	8.590
	SRR5643525	five period of Gastrodia elata	3.760
	SRR5643528	five period of Gastrodia elata	3.620
	SRR5643658	five period of Gastrodia elata	4.000
	SRR5643659	five period of Gastrodia elata	15.940
	SRR5643660	five period of Gastrodia elata	16.060
	SRR5643661	five period of Gastrodia elata	14.240
	SRR5643662	five period of Gastrodia elata	7.650
	SRR5643663	five period of Gastrodia elata	7.340
	SRR5643664	five period of Gastrodia elata	9.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	45.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	54.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	41.750
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.020
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.240
SRP279888	Gastro	Gastrodia elata tuber	25.28
	Juven	Juvenile tuber	10.88
	Mother_Gastro	Mother tuber of Gastrodia elata	26.94
	Mother_Juven	Mother tuber of Juvenile	11.49