Detail information of GWHGAAEX009479/evm.TU.scaffold_25.64
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15675501|ref|NP_269675.1| | 1.00E-25 | protein kinase [Streptococcus pyogenes M1 GAS] |
| KOG | KOG0661 | 5.00E-169 | MAPK related serine/threonine protein kinase |
| nr | gi|743870967|ref|XP_010906174.1| | 0 | PREDICTED: cyclin-dependent kinase F-3-like [Elaeis guineensis] |
| Swissprot | tr|Q84SN3|CDKF3_ORYSJ | 0 | Cyclin-dependent kinase F-3 |
| trEMBL | tr|M0TLJ6|M0TLJ6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P00940_001} |
| TAIR | AT4G13020 | 5.00E-169 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000030 | 2254577 | 2261452 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009479
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 4 | 283 | 1.70E-74 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_RCK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.410 |
| SRR2545915 | Juvenile tuber | 12.970 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.590 |
| SRR5643514 | five period of Gastrodia elata | 12.860 | |
| SRR5643515 | five period of Gastrodia elata | 15.350 | |
| SRR5643524 | five period of Gastrodia elata | 13.290 | |
| SRR5643525 | five period of Gastrodia elata | 17.550 | |
| SRR5643528 | five period of Gastrodia elata | 17.790 | |
| SRR5643658 | five period of Gastrodia elata | 17.420 | |
| SRR5643659 | five period of Gastrodia elata | 10.560 | |
| SRR5643660 | five period of Gastrodia elata | 10.940 | |
| SRR5643661 | five period of Gastrodia elata | 10.270 | |
| SRR5643662 | five period of Gastrodia elata | 11.460 | |
| SRR5643663 | five period of Gastrodia elata | 11.440 | |
| SRR5643664 | five period of Gastrodia elata | 12.670 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.690 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.550 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.870 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.910 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.650 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 10.270 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.690 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.980 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.42 |
| Juven | Juvenile tuber | 10.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 35.81 | |
| Mother_Juven | Mother tuber of Juvenile | 30.86 |