Detail information of GWHGAAEX009480/evm.TU.scaffold_25.65_evm.TU.scaffold_25.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22944.00E-135Transcription factor of the Forkhead/HNF3 family
nrgi|743866734|ref|XP_010905134.1|5.75E-163PREDICTED: uncharacterized protein LOC105032386 [Elaeis guineensis]
trEMBLtr|Q0J485|Q0J485_ORYSJ4.00E-158Os08g0528900 protein {ECO:0000313|EMBL:BAF24230.1}
TAIRAT3G072204.00E-135SMAD/FHA domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003023282462365983+
Transcript Sequence

Network for GWHGAAEX009480

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00498.25FHA371115.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.880
SRR2545915Juvenile tuber12.650
SRP108465SRR5643513five period of Gastrodia elata15.170
SRR5643514five period of Gastrodia elata13.220
SRR5643515five period of Gastrodia elata12.350
SRR5643524five period of Gastrodia elata12.020
SRR5643525five period of Gastrodia elata15.950
SRR5643528five period of Gastrodia elata13.500
SRR5643658five period of Gastrodia elata14.040
SRR5643659five period of Gastrodia elata19.660
SRR5643660five period of Gastrodia elata23.230
SRR5643661five period of Gastrodia elata28.650
SRR5643662five period of Gastrodia elata25.680
SRR5643663five period of Gastrodia elata22.850
SRR5643664five period of Gastrodia elata32.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.370
SRR6049655Rhizomagastrodiae_C368-T10_good_118.340
SRR6049656Rhizomagastrodiae_C368-T07_good_116.450
SRR6049657Rhizomagastrodiae_C368-T07_good_118.570
SRR6049658Rhizomagastrodiae_C368-T04_good_120.500
SRR6049659Rhizomagastrodiae_C368-T04_good_121.680
SRR6049660Rhizomagastrodiae_C368-T01_good_113.590
SRR6049661Rhizomagastrodiae_C368-T04_good_116.770
SRR6049662Rhizomagastrodiae_C368-T01_good_114.070
SRR6049663Rhizomagastrodiae_C368-T01_good_114.350
SRR6049664Rhizomagastrodiae_C368-T10_good_115.510
SRR6049665Rhizomagastrodiae_C368-T10_good_115.510
SRP279888GastroGastrodia elata tuber 28.84
JuvenJuvenile tuber49.19
Mother_GastroMother tuber of Gastrodia elata 38.74
Mother_JuvenMother tuber of Juvenile 61.13