Detail information of GWHGAAEX009481/evm.TU.scaffold_25.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07948.00E-125CDK8 kinase-activating protein cyclin C
nrgi|672138340|ref|XP_008792922.1|6.28E-153PREDICTED: cyclin-C1-1-like [Phoenix dactylifera]
Swissprottr|P93411|CCC11_ORYSJ3.00E-149Cyclin-C1-1
trEMBLtr|C5X4N7|C5X4N7_SORBI8.00E-148Putative uncharacterized protein Sb02g029140 {ECO:0000313|EMBL:EER97007.1}
TAIRAT5G486308.00E-125Cyclin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003023683932387708+
Transcript Sequence

Network for GWHGAAEX009481

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N351426.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.850
SRR2545915Juvenile tuber21.630
SRP108465SRR5643513five period of Gastrodia elata19.730
SRR5643514five period of Gastrodia elata25.420
SRR5643515five period of Gastrodia elata20.320
SRR5643524five period of Gastrodia elata24.690
SRR5643525five period of Gastrodia elata18.690
SRR5643528five period of Gastrodia elata22.040
SRR5643658five period of Gastrodia elata17.570
SRR5643659five period of Gastrodia elata19.490
SRR5643660five period of Gastrodia elata20.910
SRR5643661five period of Gastrodia elata23.290
SRR5643662five period of Gastrodia elata19.450
SRR5643663five period of Gastrodia elata20.080
SRR5643664five period of Gastrodia elata17.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.980
SRR6049655Rhizomagastrodiae_C368-T10_good_132.810
SRR6049656Rhizomagastrodiae_C368-T07_good_118.160
SRR6049657Rhizomagastrodiae_C368-T07_good_113.320
SRR6049658Rhizomagastrodiae_C368-T04_good_113.510
SRR6049659Rhizomagastrodiae_C368-T04_good_111.830
SRR6049660Rhizomagastrodiae_C368-T01_good_114.770
SRR6049661Rhizomagastrodiae_C368-T04_good_113.400
SRR6049662Rhizomagastrodiae_C368-T01_good_122.010
SRR6049663Rhizomagastrodiae_C368-T01_good_120.010
SRR6049664Rhizomagastrodiae_C368-T10_good_126.620
SRR6049665Rhizomagastrodiae_C368-T10_good_126.620
SRP279888GastroGastrodia elata tuber 28.62
JuvenJuvenile tuber20.74
Mother_GastroMother tuber of Gastrodia elata 24.85
Mother_JuvenMother tuber of Juvenile 18.52