Detail information of GWHGAAEX009500/CADD00742.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00172.00E-18FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
nrgi|674236684|gb|KFK29449.1|2.33E-19hypothetical protein AALP_AA7G135900 [Arabis alpina]
trEMBLtr|A0A087GHU7|A0A087GHU7_ARAAL9.00E-20Uncharacterized protein {ECO:0000313|EMBL:KFK29449.1}
TAIRAT1G592652.00E-18transposable element gene

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003030079643011691+
Transcript Sequence

Network for GWHGAAEX009500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.760
SRR2545915Juvenile tuber0.990
SRP108465SRR5643513five period of Gastrodia elata1.050
SRR5643514five period of Gastrodia elata0.490
SRR5643515five period of Gastrodia elata1.220
SRR5643524five period of Gastrodia elata1.300
SRR5643525five period of Gastrodia elata2.170
SRR5643528five period of Gastrodia elata1.990
SRR5643658five period of Gastrodia elata2.940
SRR5643659five period of Gastrodia elata1.020
SRR5643660five period of Gastrodia elata0.930
SRR5643661five period of Gastrodia elata0.890
SRR5643662five period of Gastrodia elata0.530
SRR5643663five period of Gastrodia elata1.030
SRR5643664five period of Gastrodia elata0.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.170
SRR6049655Rhizomagastrodiae_C368-T10_good_10.790
SRR6049656Rhizomagastrodiae_C368-T07_good_10.380
SRR6049657Rhizomagastrodiae_C368-T07_good_10.220
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.070
SRR6049660Rhizomagastrodiae_C368-T01_good_10.190
SRR6049661Rhizomagastrodiae_C368-T04_good_10.240
SRR6049662Rhizomagastrodiae_C368-T01_good_10.040
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.370
SRR6049665Rhizomagastrodiae_C368-T10_good_10.370
SRP279888GastroGastrodia elata tuber 0.71
JuvenJuvenile tuber0.64
Mother_GastroMother tuber of Gastrodia elata 1.45
Mother_JuvenMother tuber of Juvenile 0.86