Detail information of GWHGAAEX009505/evm.TU.scaffold_25.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|397773959|ref|YP_006541505.1|2.00E-06Alpha-1,4-glucan-protein synthase, UDP-forming [Natrinema sp. J7-2]
nrgi|695030524|ref|XP_009402728.1|2.12E-173PREDICTED: probable UDP-arabinopyranose mutase 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q7FAY6|RGP2_ORYSJ2.00E-159Probable UDP-arabinopyranose mutase 2
trEMBLtr|A0A061EZ53|A0A061EZ53_THECC5.00E-168Alpha-1,4-glucan-protein synthase family protein isoform 3 {ECO:0000313|EMBL:EOY09952.1}
TAIRAT5G165102.00E-152Alpha-1,4-glucan-protein synthase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003031007603130942+
Transcript Sequence

Network for GWHGAAEX009505

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03214.12RGP63476.90E-164
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT75

KEGG pathway

KO Enzyme pathway mapID
K13379RGP, UTM Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.540
SRR2545915Juvenile tuber10.270
SRP108465SRR5643513five period of Gastrodia elata18.970
SRR5643514five period of Gastrodia elata17.110
SRR5643515five period of Gastrodia elata16.960
SRR5643524five period of Gastrodia elata16.740
SRR5643525five period of Gastrodia elata24.930
SRR5643528five period of Gastrodia elata22.580
SRR5643658five period of Gastrodia elata29.760
SRR5643659five period of Gastrodia elata18.010
SRR5643660five period of Gastrodia elata21.370
SRR5643661five period of Gastrodia elata21.750
SRR5643662five period of Gastrodia elata16.890
SRR5643663five period of Gastrodia elata17.520
SRR5643664five period of Gastrodia elata16.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.580
SRR6049655Rhizomagastrodiae_C368-T10_good_112.720
SRR6049656Rhizomagastrodiae_C368-T07_good_116.950
SRR6049657Rhizomagastrodiae_C368-T07_good_118.870
SRR6049658Rhizomagastrodiae_C368-T04_good_115.280
SRR6049659Rhizomagastrodiae_C368-T04_good_117.030
SRR6049660Rhizomagastrodiae_C368-T01_good_116.700
SRR6049661Rhizomagastrodiae_C368-T04_good_114.510
SRR6049662Rhizomagastrodiae_C368-T01_good_120.010
SRR6049663Rhizomagastrodiae_C368-T01_good_117.130
SRR6049664Rhizomagastrodiae_C368-T10_good_120.100
SRR6049665Rhizomagastrodiae_C368-T10_good_120.100
SRP279888GastroGastrodia elata tuber 14.69
JuvenJuvenile tuber20.48
Mother_GastroMother tuber of Gastrodia elata 13.52
Mother_JuvenMother tuber of Juvenile 15.65