Detail information of GWHGAAEX009507/evm.TU.scaffold_25.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|470107600|ref|XP_004290132.1|1.17E-62PREDICTED: uncharacterized protein LOC101296442 isoform 1 [Fragaria vesca subsp. vesca]
trEMBLtr|M5VP51|M5VP51_PRUPE1.00E-60Uncharacterized protein {ECO:0000313|EMBL:EMJ03027.1}
TAIRAT3G074704.00E-50Protein of unknown function, DUF538

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003032471883248427+
Transcript Sequence

Network for GWHGAAEX009507

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04398.11DUF538381455.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.600
SRR2545915Juvenile tuber30.640
SRP108465SRR5643513five period of Gastrodia elata35.510
SRR5643514five period of Gastrodia elata46.600
SRR5643515five period of Gastrodia elata35.710
SRR5643524five period of Gastrodia elata21.520
SRR5643525five period of Gastrodia elata130.040
SRR5643528five period of Gastrodia elata55.720
SRR5643658five period of Gastrodia elata76.770
SRR5643659five period of Gastrodia elata103.920
SRR5643660five period of Gastrodia elata124.560
SRR5643661five period of Gastrodia elata103.890
SRR5643662five period of Gastrodia elata38.660
SRR5643663five period of Gastrodia elata33.940
SRR5643664five period of Gastrodia elata38.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.750
SRR6049655Rhizomagastrodiae_C368-T10_good_139.560
SRR6049656Rhizomagastrodiae_C368-T07_good_134.530
SRR6049657Rhizomagastrodiae_C368-T07_good_132.750
SRR6049658Rhizomagastrodiae_C368-T04_good_126.180
SRR6049659Rhizomagastrodiae_C368-T04_good_119.410
SRR6049660Rhizomagastrodiae_C368-T01_good_135.140
SRR6049661Rhizomagastrodiae_C368-T04_good_122.590
SRR6049662Rhizomagastrodiae_C368-T01_good_145.830
SRR6049663Rhizomagastrodiae_C368-T01_good_148.060
SRR6049664Rhizomagastrodiae_C368-T10_good_136.850
SRR6049665Rhizomagastrodiae_C368-T10_good_136.850
SRP279888GastroGastrodia elata tuber 28.09
JuvenJuvenile tuber17.23
Mother_GastroMother tuber of Gastrodia elata 18.40
Mother_JuvenMother tuber of Juvenile 9.07