Detail information of GWHGAAEX009509/evm.TU.scaffold_25.105


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428225879|ref|YP_007109976.1|5.00E-11G-D-S-L family lipolytic protein [Geitlerinema sp. PCC 7407]
nrgi|719972935|ref|XP_010278961.1|0PREDICTED: GDSL esterase/lipase At1g54790-like [Nelumbo nucifera]
Swissprottr|Q3ECP6|GDL22_ARATH0GDSL esterase/lipase At1g54790 (Precursor)
trEMBLtr|B9I7Z1|B9I7Z1_POPTR0GDSL-motif lipase/hydrolase family protein {ECO:0000313|EMBL:EEE94952.2}
TAIRAT1G547900GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003033176483357131-
Transcript Sequence

Network for GWHGAAEX009509

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00657.21Lipase_GDSL323594.50E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.670
SRR2545915Juvenile tuber34.980
SRP108465SRR5643513five period of Gastrodia elata42.690
SRR5643514five period of Gastrodia elata49.840
SRR5643515five period of Gastrodia elata42.350
SRR5643524five period of Gastrodia elata43.560
SRR5643525five period of Gastrodia elata171.120
SRR5643528five period of Gastrodia elata244.270
SRR5643658five period of Gastrodia elata570.830
SRR5643659five period of Gastrodia elata34.000
SRR5643660five period of Gastrodia elata31.470
SRR5643661five period of Gastrodia elata32.210
SRR5643662five period of Gastrodia elata27.210
SRR5643663five period of Gastrodia elata31.620
SRR5643664five period of Gastrodia elata27.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.980
SRR6049655Rhizomagastrodiae_C368-T10_good_158.080
SRR6049656Rhizomagastrodiae_C368-T07_good_150.610
SRR6049657Rhizomagastrodiae_C368-T07_good_151.490
SRR6049658Rhizomagastrodiae_C368-T04_good_143.390
SRR6049659Rhizomagastrodiae_C368-T04_good_139.020
SRR6049660Rhizomagastrodiae_C368-T01_good_143.830
SRR6049661Rhizomagastrodiae_C368-T04_good_153.500
SRR6049662Rhizomagastrodiae_C368-T01_good_151.760
SRR6049663Rhizomagastrodiae_C368-T01_good_145.760
SRR6049664Rhizomagastrodiae_C368-T10_good_151.830
SRR6049665Rhizomagastrodiae_C368-T10_good_151.830
SRP279888GastroGastrodia elata tuber 26.00
JuvenJuvenile tuber22.96
Mother_GastroMother tuber of Gastrodia elata 22.22
Mother_JuvenMother tuber of Juvenile 18.08