Gene detail

Detail information of GWHGAAEX009531/evm.TU.scaffold_25.134

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|320160316\|ref\|YP_004173540.1\|	1.00E-08	hypothetical protein ANT_09060 [Anaerolinea thermophila UNI-1]
KOG	KOG4747	1.00E-54	Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
nr	gi\|720082387\|ref\|XP_010242575.1\|	6.04E-70	PREDICTED: histidine-containing phosphotransfer protein 1 isoform X1 [Nelumbo nucifera]
Swissprot	tr\|Q9ZNV9\|AHP1_ARATH	3.00E-55	Histidine-containing phosphotransfer protein 1
trEMBL	tr\|M0RVA0\|M0RVA0_MUSAM	5.00E-70	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P25200_001}
TAIR	AT3G21510	1.00E-54	histidine-containing phosphotransmitter 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000030	4280235	4282049	-

Transcript Sequence
>GWHTAAEX009531 GTTTTTTCCTAGGGAGTTGATGATAAGGTAAAGCTCCTACATCCGAGAAGGAATGGAGGAGAGGAAGCCATTCACCCCCTTTAAACCTTGCGAGGGTGAAAAAACCCTAGCAATAATAGGATAGAAGCAATAATACTTTTTGGAAGTATGTATGCAAAAATTTTGTAAATTAAATTATATTATTGGAGTTATTTGTCTCTAGTCGCTTACACGATATCGACCCATCAAGGCCACACAAGAAGCCAAGCAGCGTAAAATGCGCCAAAGTTACCAACTTGTTTTATGCGTTTCCTCGAATCGCAGAAGCCCATCGATCTGAGAAGAGGAGAAGCCGAAAAGCAGAGAGGTGAGATGGACGTTCTTCAGCTTCAGCGCCAGTGGATAGATCTCATCTCCGCTCTTTTCCGCGAGGGATTTTTGGATGAGCAATTTACGCAGCTCCAGCAGCTGCAGGACGAGAGCAACCCAGATTTTGTGATCGAGGTTGTAACCCTCTTCTTTGAGGATTCCGAAAGGCTTCTAAACGACCTCTTCAGCGTTTTAAGCCAACAGGTGGTGGACTTCAAGAAGGTCGACGCCCATGTTCACCAGTTGAAGGGGAGCAGCGCAAGCATAGGAGCACAGAGGGTGAAGAATGTGTGCATATCATTCAGAACCTGCTGTGAGGAAGGAAATCTGGAGGGATGTTTTGGATGCTTGCAGCAAGTAAAGCAAGAATACTCCCTCGCAAAGACCAAGCTCGAAGCTCTGTTTGGGGTAATCAGCCATGTGCTTTGTTTCCTCTTTCTGGTCTCATATGAATGCAAAAATTATCTTTTTCTTTTTCTATTTGAAATTATGCAGCTAGAGCAACAGATTATAGCTGCTGGTGGATCACTGCCATTAGTGTAGGATTGGCACATTTCGAATTTGGATTTTGCAGACGGAGAAGAGAAGAAGGAAGGAGCAGTCATTTGATTTCTCATGAACCATTCTGGGCCCACTTGGTTTGCTGAGCCTGAGCTGTTCCATGTAATGATCCTTTTCTGCAAGTTTTTTTGCCTTTTTCTTTATTCTCCAATCTTGCATGTTAAGGTAGTCTTTAGACCTTATTCTTGTAATTTCTCTTCTTGAGATAGATCTAGATTGTACTACTATCAATTGTTAATATTATGCGGTCACTATCTACTTTTATTTGACGTTATGCGGCTATTGCGATTTGATTAATACCTTTTCTATCGATGAGGAGAAACATGTACAAGTAAATATAGCACAACAAGCTTGTGAAACAATGAAAACGATCTCTTATTGACTACTCTGATAGAGGATAAGATTAGAGAACATTGACTTGAATGATTCAGGAGGCGTTCGATGCCATTGTTGGAAAAATAAAGTACATGTTAAAAGTGGAGGAGGAAGATCAAAAAAGACATGAAATGAAACATTAGAATGTTCTTCTCTGTTTGGAATTTAAGGAGGAGGAGGAGGAGGAGG

Network for GWHGAAEX009531

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01627.22	Hpt	67	148	4.10E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14490	AHP	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0000160	Biological Process	phosphorelay signal transduction system

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.870
SRP064423	SRR2545915	Juvenile tuber	25.620
SRP108465	SRR5643513	five period of Gastrodia elata	28.830
	SRR5643514	five period of Gastrodia elata	30.040
	SRR5643515	five period of Gastrodia elata	23.230
	SRR5643524	five period of Gastrodia elata	26.130
	SRR5643525	five period of Gastrodia elata	14.150
	SRR5643528	five period of Gastrodia elata	6.890
	SRR5643658	five period of Gastrodia elata	10.300
	SRR5643659	five period of Gastrodia elata	31.770
	SRR5643660	five period of Gastrodia elata	29.520
	SRR5643661	five period of Gastrodia elata	25.280
	SRR5643662	five period of Gastrodia elata	11.910
	SRR5643663	five period of Gastrodia elata	11.140
	SRR5643664	five period of Gastrodia elata	12.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.560
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.750
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.580
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.640
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	25.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	25.110
SRP279888	Gastro	Gastrodia elata tuber	11.10
	Juven	Juvenile tuber	28.77
	Mother_Gastro	Mother tuber of Gastrodia elata	7.96
	Mother_Juven	Mother tuber of Juvenile	10.94