Detail information of GWHGAAEX009532/evm.TU.scaffold_25.136


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16032.00E-31Copper chaperone
nrgi|743821113|ref|XP_010931956.1|3.03E-44PREDICTED: RNA-binding protein cabeza [Elaeis guineensis]
Swissprottr|Q94BT9|ATOX1_ARATH7.00E-10Copper transport protein ATX1
trEMBLtr|M0TLE0|M0TLE0_MUSAM4.00E-42Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P00380_001}
TAIRAT3G061302.00E-31Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003043348114336218-
Transcript Sequence

Network for GWHGAAEX009532

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA17734.90E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms114.530
SRR2545915Juvenile tuber174.790
SRP108465SRR5643513five period of Gastrodia elata95.390
SRR5643514five period of Gastrodia elata99.090
SRR5643515five period of Gastrodia elata71.810
SRR5643524five period of Gastrodia elata93.270
SRR5643525five period of Gastrodia elata81.050
SRR5643528five period of Gastrodia elata62.770
SRR5643658five period of Gastrodia elata76.210
SRR5643659five period of Gastrodia elata172.890
SRR5643660five period of Gastrodia elata196.600
SRR5643661five period of Gastrodia elata127.570
SRR5643662five period of Gastrodia elata100.180
SRR5643663five period of Gastrodia elata113.060
SRR5643664five period of Gastrodia elata126.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_193.570
SRR6049655Rhizomagastrodiae_C368-T10_good_159.850
SRR6049656Rhizomagastrodiae_C368-T07_good_1106.260
SRR6049657Rhizomagastrodiae_C368-T07_good_190.700
SRR6049658Rhizomagastrodiae_C368-T04_good_157.380
SRR6049659Rhizomagastrodiae_C368-T04_good_143.170
SRR6049660Rhizomagastrodiae_C368-T01_good_187.560
SRR6049661Rhizomagastrodiae_C368-T04_good_198.560
SRR6049662Rhizomagastrodiae_C368-T01_good_1105.080
SRR6049663Rhizomagastrodiae_C368-T01_good_170.920
SRR6049664Rhizomagastrodiae_C368-T10_good_179.840
SRR6049665Rhizomagastrodiae_C368-T10_good_179.840
SRP279888GastroGastrodia elata tuber 164.61
JuvenJuvenile tuber57.37
Mother_GastroMother tuber of Gastrodia elata 27.26
Mother_JuvenMother tuber of Juvenile 27.04