Detail information of GWHGAAEX009533/evm.TU.scaffold_25.139


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|402774032|ref|YP_006593569.1|3.00E-63amidase [Methylocystis sp. SC2]
KOGKOG12114.00E-94Amidases
nrgi|672188780|ref|XP_008813665.1|6.08E-168PREDICTED: amidase 1-like [Phoenix dactylifera]
Swissprottr|Q9FR37|AMI1_ARATH2.00E-128Amidase 1
trEMBLtr|M0SD20|M0SD20_MUSAM2.00E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P09030_001}
TAIRAT5G09420_14.00E-94Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003044401574471148-
Transcript Sequence

Network for GWHGAAEX009533

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01425.20Amidase1965.50E-39
PF01425.20Amidase2233285.30E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01426E3.5.1.4, amiE Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Arginine and proline metabolismmap00330
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Aminobenzoate degradationmap00627
Styrene degradationmap00643

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.120
SRR2545915Juvenile tuber30.920
SRP108465SRR5643513five period of Gastrodia elata19.220
SRR5643514five period of Gastrodia elata21.860
SRR5643515five period of Gastrodia elata19.310
SRR5643524five period of Gastrodia elata18.580
SRR5643525five period of Gastrodia elata27.040
SRR5643528five period of Gastrodia elata26.710
SRR5643658five period of Gastrodia elata26.820
SRR5643659five period of Gastrodia elata23.840
SRR5643660five period of Gastrodia elata25.860
SRR5643661five period of Gastrodia elata21.700
SRR5643662five period of Gastrodia elata19.630
SRR5643663five period of Gastrodia elata29.580
SRR5643664five period of Gastrodia elata26.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.470
SRR6049655Rhizomagastrodiae_C368-T10_good_116.210
SRR6049656Rhizomagastrodiae_C368-T07_good_121.140
SRR6049657Rhizomagastrodiae_C368-T07_good_127.220
SRR6049658Rhizomagastrodiae_C368-T04_good_132.740
SRR6049659Rhizomagastrodiae_C368-T04_good_131.720
SRR6049660Rhizomagastrodiae_C368-T01_good_127.230
SRR6049661Rhizomagastrodiae_C368-T04_good_127.030
SRR6049662Rhizomagastrodiae_C368-T01_good_119.050
SRR6049663Rhizomagastrodiae_C368-T01_good_124.760
SRR6049664Rhizomagastrodiae_C368-T10_good_119.620
SRR6049665Rhizomagastrodiae_C368-T10_good_119.620
SRP279888GastroGastrodia elata tuber 43.64
JuvenJuvenile tuber32.62
Mother_GastroMother tuber of Gastrodia elata 47.82
Mother_JuvenMother tuber of Juvenile 33.13