Detail information of GWHGAAEX009548/evm.TU.scaffold_25.157


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|501436151|ref|YP_007984945.1|9.00E-30membrane protein of unknown function [Candidatus Saccharimonas aalborgensis]
KOGKOG21180Predicted membrane protein, contains two CBS domains
nrgi|743846146|ref|XP_010938761.1|0PREDICTED: DUF21 domain-containing protein At4g14240 [Elaeis guineensis]
Swissprottr|Q67XQ0|Y4424_ARATH0DUF21 domain-containing protein At4g14240
trEMBLtr|M0T0J2|M0T0J2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P21670_001}
TAIRAT1G032700CBS domain-containing protein with a domain of unknown function (DUF21)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003051490445187851+
Transcript Sequence

Network for GWHGAAEX009548

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01595.19DUF21502221.00E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.610
SRR2545915Juvenile tuber46.270
SRP108465SRR5643513five period of Gastrodia elata30.010
SRR5643514five period of Gastrodia elata33.930
SRR5643515five period of Gastrodia elata24.830
SRR5643524five period of Gastrodia elata30.680
SRR5643525five period of Gastrodia elata43.160
SRR5643528five period of Gastrodia elata36.760
SRR5643658five period of Gastrodia elata42.220
SRR5643659five period of Gastrodia elata22.560
SRR5643660five period of Gastrodia elata22.480
SRR5643661five period of Gastrodia elata23.570
SRR5643662five period of Gastrodia elata19.040
SRR5643663five period of Gastrodia elata21.470
SRR5643664five period of Gastrodia elata20.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.800
SRR6049655Rhizomagastrodiae_C368-T10_good_127.980
SRR6049656Rhizomagastrodiae_C368-T07_good_137.320
SRR6049657Rhizomagastrodiae_C368-T07_good_135.980
SRR6049658Rhizomagastrodiae_C368-T04_good_129.370
SRR6049659Rhizomagastrodiae_C368-T04_good_133.070
SRR6049660Rhizomagastrodiae_C368-T01_good_140.890
SRR6049661Rhizomagastrodiae_C368-T04_good_133.530
SRR6049662Rhizomagastrodiae_C368-T01_good_135.210
SRR6049663Rhizomagastrodiae_C368-T01_good_136.270
SRR6049664Rhizomagastrodiae_C368-T10_good_135.280
SRR6049665Rhizomagastrodiae_C368-T10_good_135.280
SRP279888GastroGastrodia elata tuber 23.54
JuvenJuvenile tuber34.90
Mother_GastroMother tuber of Gastrodia elata 25.72
Mother_JuvenMother tuber of Juvenile 27.10