Detail information of GWHGAAEX009554/evm.TU.scaffold_25.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16031.00E-22Copper chaperone
nrgi|695073256|ref|XP_009383786.1|5.00E-27PREDICTED: uncharacterized protein LOC103971484 [Musa acuminata subsp. malaccensis]
Swissprottr|Q94BT9|ATOX1_ARATH7.00E-15Copper transport protein ATX1
trEMBLtr|W5BKA7|W5BKA7_WHEAT4.00E-28Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_2BS_5732BEC8A.2}
TAIRAT5G276901.00E-22Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003052974105298381-
Transcript Sequence

Network for GWHGAAEX009554

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA18732.10E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.260
SRR2545915Juvenile tuber7.020
SRP108465SRR5643513five period of Gastrodia elata1.500
SRR5643514five period of Gastrodia elata2.600
SRR5643515five period of Gastrodia elata1.500
SRR5643524five period of Gastrodia elata1.330
SRR5643525five period of Gastrodia elata0.810
SRR5643528five period of Gastrodia elata1.400
SRR5643658five period of Gastrodia elata0.880
SRR5643659five period of Gastrodia elata6.470
SRR5643660five period of Gastrodia elata8.110
SRR5643661five period of Gastrodia elata11.770
SRR5643662five period of Gastrodia elata7.320
SRR5643663five period of Gastrodia elata9.020
SRR5643664five period of Gastrodia elata9.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.580
SRR6049655Rhizomagastrodiae_C368-T10_good_10.970
SRR6049656Rhizomagastrodiae_C368-T07_good_11.310
SRR6049657Rhizomagastrodiae_C368-T07_good_11.350
SRR6049658Rhizomagastrodiae_C368-T04_good_10.710
SRR6049659Rhizomagastrodiae_C368-T04_good_10.710
SRR6049660Rhizomagastrodiae_C368-T01_good_10.090
SRR6049661Rhizomagastrodiae_C368-T04_good_10.110
SRR6049662Rhizomagastrodiae_C368-T01_good_10.570
SRR6049663Rhizomagastrodiae_C368-T01_good_10.400
SRR6049664Rhizomagastrodiae_C368-T10_good_11.800
SRR6049665Rhizomagastrodiae_C368-T10_good_11.800
SRP279888GastroGastrodia elata tuber 7.48
JuvenJuvenile tuber4.80
Mother_GastroMother tuber of Gastrodia elata 2.24
Mother_JuvenMother tuber of Juvenile 2.33