Detail information of GWHGAAEX009555/evm.TU.scaffold_25.167


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15608246|ref|NP_215622.1|4.00E-433-beta-hydroxysteroid dehydrogenase [Mycobacterium tuberculosis H37Rv]
KOGKOG14307.00E-168C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
nrgi|743840614|ref|XP_010937310.1|0PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 isoform X1 [Elaeis guineensis]
Swissprottr|Q67ZE1|HSDD2_ARATH03beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
trEMBLtr|F6H2U3|F6H2U3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46628.1}
TAIRAT1G472907.00E-1683beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003053168245353866-
Transcript Sequence

Network for GWHGAAEX009555

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01073.183Beta_HSD121961.40E-57
PF02453.16Reticulon2914482.40E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K235583BETAHSDD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Steroid biosynthesismap00100

Gene Ontology

GO term OntologyName
GO:0006694Biological Processsteroid biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0003854Molecular Function3-beta-hydroxy-delta5-steroid dehydrogenase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.380
SRR2545915Juvenile tuber9.190
SRP108465SRR5643513five period of Gastrodia elata7.260
SRR5643514five period of Gastrodia elata7.180
SRR5643515five period of Gastrodia elata7.850
SRR5643524five period of Gastrodia elata8.340
SRR5643525five period of Gastrodia elata8.370
SRR5643528five period of Gastrodia elata11.850
SRR5643658five period of Gastrodia elata12.720
SRR5643659five period of Gastrodia elata5.840
SRR5643660five period of Gastrodia elata5.520
SRR5643661five period of Gastrodia elata6.200
SRR5643662five period of Gastrodia elata5.580
SRR5643663five period of Gastrodia elata5.650
SRR5643664five period of Gastrodia elata3.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.630
SRR6049655Rhizomagastrodiae_C368-T10_good_17.210
SRR6049656Rhizomagastrodiae_C368-T07_good_18.520
SRR6049657Rhizomagastrodiae_C368-T07_good_16.940
SRR6049658Rhizomagastrodiae_C368-T04_good_15.150
SRR6049659Rhizomagastrodiae_C368-T04_good_14.110
SRR6049660Rhizomagastrodiae_C368-T01_good_17.240
SRR6049661Rhizomagastrodiae_C368-T04_good_17.720
SRR6049662Rhizomagastrodiae_C368-T01_good_112.140
SRR6049663Rhizomagastrodiae_C368-T01_good_17.050
SRR6049664Rhizomagastrodiae_C368-T10_good_18.900
SRR6049665Rhizomagastrodiae_C368-T10_good_18.900
SRP279888GastroGastrodia elata tuber 5.60
JuvenJuvenile tuber9.85
Mother_GastroMother tuber of Gastrodia elata 5.90
Mother_JuvenMother tuber of Juvenile 7.15