Detail information of GWHGAAEX009558/evm.TU.scaffold_25.170


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|126700193|ref|YP_001089090.1|5.00E-14thiamine pyrophosphokinase [Clostridium difficile 630]
KOGKOG31532.00E-118Thiamine pyrophosphokinase
nrgi|672132647|ref|XP_008789909.1|8.42E-149PREDICTED: thiamine pyrophosphokinase 1 isoform X2 [Phoenix dactylifera]
Swissprottr|Q5JK24|TPK1_ORYSJ6.00E-133Thiamine pyrophosphokinase 1
trEMBLtr|A0A067H609|A0A067H609_CITSI1.00E-134Uncharacterized protein {ECO:0000313|EMBL:KDO87274.1}
TAIRAT2G447502.00E-118thiamin pyrophosphokinase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003054090185422535-
Transcript Sequence

Network for GWHGAAEX009558

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04263.15TPK_catalytic401656.80E-40
PF04265.13TPK_B1_binding1832493.60E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00949thiN, TPK1, THI80 Metabolic pathways map01100
Thiamine metabolismmap00730

Gene Ontology

GO term OntologyName
GO:0009229Biological Processthiamine diphosphate biosynthetic process
GO:0006772Biological Processthiamine metabolic process
GO:0005524Molecular FunctionATP binding
GO:0030975Molecular Functionthiamine binding
GO:0004788Molecular Functionthiamine diphosphokinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.120
SRR2545915Juvenile tuber11.910
SRP108465SRR5643513five period of Gastrodia elata58.750
SRR5643514five period of Gastrodia elata36.570
SRR5643515five period of Gastrodia elata55.430
SRR5643524five period of Gastrodia elata46.580
SRR5643525five period of Gastrodia elata20.400
SRR5643528five period of Gastrodia elata36.110
SRR5643658five period of Gastrodia elata23.140
SRR5643659five period of Gastrodia elata19.190
SRR5643660five period of Gastrodia elata17.510
SRR5643661five period of Gastrodia elata22.930
SRR5643662five period of Gastrodia elata23.390
SRR5643663five period of Gastrodia elata19.370
SRR5643664five period of Gastrodia elata13.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.990
SRR6049655Rhizomagastrodiae_C368-T10_good_136.630
SRR6049656Rhizomagastrodiae_C368-T07_good_137.030
SRR6049657Rhizomagastrodiae_C368-T07_good_123.980
SRR6049658Rhizomagastrodiae_C368-T04_good_135.480
SRR6049659Rhizomagastrodiae_C368-T04_good_129.430
SRR6049660Rhizomagastrodiae_C368-T01_good_120.920
SRR6049661Rhizomagastrodiae_C368-T04_good_125.340
SRR6049662Rhizomagastrodiae_C368-T01_good_141.740
SRR6049663Rhizomagastrodiae_C368-T01_good_133.840
SRR6049664Rhizomagastrodiae_C368-T10_good_158.940
SRR6049665Rhizomagastrodiae_C368-T10_good_158.940
SRP279888GastroGastrodia elata tuber 22.48
JuvenJuvenile tuber43.22
Mother_GastroMother tuber of Gastrodia elata 42.65
Mother_JuvenMother tuber of Juvenile 68.37