Gene detail

Detail information of GWHGAAEX009595/evm.TU.scaffold_25.210

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|672192291\|ref\|XP_008775730.1\|	0	PREDICTED: kinesin-like protein NACK1 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	6.00E-146	Kinesin-like protein NACK1
trEMBL	tr\|M0RXY6\|M0RXY6_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT4G38950	0	ATP binding microtubule motor family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000030	6436560	6442700	+

Transcript Sequence
>GWHTAAEX009595 ATGCGCGAAAGATCAACCTCATCTCCTTCTCCAAGTTCTGCAGAAGAGTTTCACGGCAGGGCTCAAGGAGAAATTGATGGAGAGAGCGAGGAGAGGATAGTTGTTTCAGTGAGGGTGAGACCCCTCAATTGGAAGGAGATCGAGAAGAGCGATCAATCAGAATGGGAGATCATTAATGATAATACAATCATCTTTAAGAGCAGCCTTCCAGATCGATCCCTGCTGCCATGTGCTTACACTTTTGATAGAGTTTTTGGGCACAGTAGTGACACAAGGCAAGTTTATGAGGAAGCGGCAAAGGAAGTTGCTCTTTCTGTAGTGAAGGGTATTAACTCAAGTGTTTTTGCCTATGGGCAAACAAGCAGTGGGAAGACTTACACAATGAATGGAATAACTCAGCACGCTGTGGAAGATATTTATGATTATATCCAGAAGCACGAAGAGAGAGAGTTCTTTTTGAAGTTCTCAGCTATGGAGATCTATAATGAAGCTGTTAGAGATCTTCTGAGTGCAGACAACACTCCCCTTAGGCTTCTTGATGATCCAGAGAGGGGTACAACTGTTGAGAAGCTTACAGAGAAAATTCTAAGGGATAAAAGCCATTTTGAGGAGCTTCTAGCTATTTGTGAAGATCAAAGGCAGATTGGGGAAACTTCTTTAAATGAAGCGAGCTCCAGATCTCATCAAATTCTCAGACTGACTGTTGAAAGCTCAGCCAGGAATTTCCATGTCACAAGCTCGCTTGCAGCCAGTGTGAGCTTTGTTGATCTGGCTGGCAGTGAGAGGGCATCTCAGACTTTATCCAGCGGGGCAAGGCTAAAAGAAGGCAGTCACATAAATAGGAGTTTACTTACTCTAGGAACTGTTATTCGCAAACTTAGCAAGGGGGGAAGTGAGCATGTTCCTTACCGAGATTCGAAGCTGACACGGATATTACAAAATTCATTGGGTGGTAACGCGAGAACTGCAATTATTTGCACAATGAGCCCTGCACGAATGCATGCAGAGCAGTCGAGAAACACCCTTCTATTTGCAAGCTGTGCGAAGGAAGTGCCGACCAGTGCAAAGGTTAACGTTGTCATGTCTGACAAGGCATTGGTAAAGCATTTACAGAAAGAACTTTCAAGGCTGGAAGATGAATTGCGCTGTGCAGGCTTGGCAAATAGAATTCCACATCTTAATGAACTAAATGAGAAACAGGCCCAAATTATGAAGCTGGAGATAGAGATGAGGGAACTGATTCAGCAGAGAGACCTCGCGCAGTCTCAACTAGAGGACGTGCTTAGCTCTGTCGGGGGTGAAGAAGCATTGAGACACTCGTTTGACCAACGATCACCTAGCCATGAACCTGCTCCTTCTGAAGATGAATCATTGATGCCCGAAGTATTGGTCACCTACTATCCAAGTTATCTGATTTCAGAATTAGGCATGTCAAAGCACAGATTAGAGAATTCCGAGAACGCAGCAAGCAGCGGAAGAGACATTCCTCAAAATGCTTATCATGATCCGGCAATAGTTGAATCCGTATTCAAAAGTTCCGATGATCATTGCAAAGACGTTCCATGCATTGAAATAAATGATCCGAAGGAGAATACAAATGAGTCCAATTTCTTGCTAAATTCGCCTACATTTCGTGCCTCTGCCCTTTCCACAACTTATCAGGAAAATCAAGTACCTAGTACAAAATCTATTTGTCCGGAGGCTACGGAACAAAATAACATCGAACGAGCTCCCAAAATACTAAGGGACTATCTAAGTAGGCCTGAAAATGCCTTGAGCAAAGAATTTTCAGCAAGCTTTGGAGCAGAAACTGAAGTTCCTTCAGGAGTTTCTCAGAAACTACAGAATTCTTATGGCGAGTGGCTCAAAATTCGAGATATCAAAAGAACTGATAAGTTGTTCGATGTGGAGCATAGCAGCACTCGTGAAGAAGGGATTAGGCCTAGCAAAAATTCTTCTTGCTTGAGGACTGCTTATGAAGATGCTGACATTCCAAGCATTTCCAACTTTGTTGGAGAACCTCAAGCAGAGTATCAGGATATATTAACACATAATCAGGATATACATCAGATCCCAAATGATAACTATAAGGTGAAGAAAACCATAAGGGACGATAGCACTGAAACGATGTCAAGCTCCTCAGAATCTCATTCTCAATGGCCTGTGGAATTTAAAAAGCAGCAAAGAGAAATAATTGAATTATGGGATGCATGCAATGTGTCCTTAATCCACAGGACTTACTTCTTCCTCCTCTTTAAAGGTGAGCCTAATGACTCTATCTATATGGAGGTGGAACTTCGGCGGCTATCTTTTCTTAAACAGAGACAAATTTGCGGAAATGAGGCTGGAATGGTTTCATCAAGCCTGAAAAATCTTCGACGTGAGAGGGAGATGCTTCATAAGATGCTGCGAAGGAGGCTAAGTTCAGAGGAAAGGAAGCAGCTCTACATTAAGTGGGGTATAAACCTGGGTTCTAAGAAGCGTGCAGGGCAGCTGGTTCAGCTGTTGTGGGCTGATGCAAAGGACACCGAAAGCATCAAAGAGAGCTCATTGCTTGTTGCCAAACTGGCCGGAGAGCCAGACCAAACCCTCAAGGAAATGTTTGGGCTTAGCTTCATGCCACAACAAGCCTATCGTCGAACTTTTAGCTGGAAACGAAAGCCTTCTCTATAG

Network for GWHGAAEX009595

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	38	351	2.90E-96
PF11995.7	DUF3490	723	874	1.20E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.920
SRP064423	SRR2545915	Juvenile tuber	8.180
SRP108465	SRR5643513	five period of Gastrodia elata	23.800
	SRR5643514	five period of Gastrodia elata	12.800
	SRR5643515	five period of Gastrodia elata	11.140
	SRR5643524	five period of Gastrodia elata	10.500
	SRR5643525	five period of Gastrodia elata	2.750
	SRR5643528	five period of Gastrodia elata	2.680
	SRR5643658	five period of Gastrodia elata	4.270
	SRR5643659	five period of Gastrodia elata	2.480
	SRR5643660	five period of Gastrodia elata	2.540
	SRR5643661	five period of Gastrodia elata	2.440
	SRR5643662	five period of Gastrodia elata	2.640
	SRR5643663	five period of Gastrodia elata	3.040
	SRR5643664	five period of Gastrodia elata	2.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	28.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	17.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	41.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	41.470
SRP279888	Gastro	Gastrodia elata tuber	3.09
	Juven	Juvenile tuber	5.38
	Mother_Gastro	Mother tuber of Gastrodia elata	4.43
	Mother_Juven	Mother tuber of Juvenile	5.28