Detail information of GWHGAAEX009602/evm.TU.scaffold_25.220


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47585.00E-162Predicted membrane protein
nrgi|672180252|ref|XP_008810311.1|0PREDICTED: transmembrane protein 120 homolog isoform X1 [Phoenix dactylifera]
trEMBLtr|D7TVW8|D7TVW8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI34643.3}
TAIRAT1G332305.00E-162TMPIT-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003065884756604048-
Transcript Sequence

Network for GWHGAAEX009602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07851.12TMPIT333586.60E-99
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms116.030
SRR2545915Juvenile tuber93.990
SRP108465SRR5643513five period of Gastrodia elata43.440
SRR5643514five period of Gastrodia elata38.300
SRR5643515five period of Gastrodia elata42.530
SRR5643524five period of Gastrodia elata42.190
SRR5643525five period of Gastrodia elata53.890
SRR5643528five period of Gastrodia elata44.280
SRR5643658five period of Gastrodia elata63.000
SRR5643659five period of Gastrodia elata57.370
SRR5643660five period of Gastrodia elata67.240
SRR5643661five period of Gastrodia elata61.260
SRR5643662five period of Gastrodia elata56.520
SRR5643663five period of Gastrodia elata58.680
SRR5643664five period of Gastrodia elata73.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.290
SRR6049655Rhizomagastrodiae_C368-T10_good_158.070
SRR6049656Rhizomagastrodiae_C368-T07_good_156.130
SRR6049657Rhizomagastrodiae_C368-T07_good_183.520
SRR6049658Rhizomagastrodiae_C368-T04_good_192.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1106.310
SRR6049660Rhizomagastrodiae_C368-T01_good_169.450
SRR6049661Rhizomagastrodiae_C368-T04_good_176.110
SRR6049662Rhizomagastrodiae_C368-T01_good_148.500
SRR6049663Rhizomagastrodiae_C368-T01_good_158.270
SRR6049664Rhizomagastrodiae_C368-T10_good_146.940
SRR6049665Rhizomagastrodiae_C368-T10_good_146.940
SRP279888GastroGastrodia elata tuber 86.33
JuvenJuvenile tuber54.74
Mother_GastroMother tuber of Gastrodia elata 49.62
Mother_JuvenMother tuber of Juvenile 58.77