Detail information of GWHGAAEX009604/evm.TU.scaffold_25.222
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|402772508|ref|YP_006592045.1| | 4.00E-28 | cytochrome P450 [Methylocystis sp. SC2] |
| KOG | KOG0156 | 1.00E-167 | Cytochrome P450 CYP2 subfamily |
| nr | gi|743831225|ref|XP_010934622.1| | 0 | PREDICTED: cytochrome P450 89A2-like [Elaeis guineensis] |
| Swissprot | tr|Q9SRQ1|C89A9_ARATH | 1.00E-147 | Cytochrome P450 89A9 |
| trEMBL | tr|F2DHI1|F2DHI1_HORVD | 1.00E-179 | Predicted protein {ECO:0000313|EMBL:BAJ94552.1} |
| TAIR | AT1G64940 | 1.00E-167 | cytochrome P450, family 87, subfamily A, polypeptide 6 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000030 | 6649876 | 6651756 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009604
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 33 | 492 | 2.20E-91 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP89A6 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.870 |
| SRR2545915 | Juvenile tuber | 11.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 37.360 |
| SRR5643514 | five period of Gastrodia elata | 35.570 | |
| SRR5643515 | five period of Gastrodia elata | 30.350 | |
| SRR5643524 | five period of Gastrodia elata | 33.190 | |
| SRR5643525 | five period of Gastrodia elata | 33.130 | |
| SRR5643528 | five period of Gastrodia elata | 29.120 | |
| SRR5643658 | five period of Gastrodia elata | 36.250 | |
| SRR5643659 | five period of Gastrodia elata | 23.920 | |
| SRR5643660 | five period of Gastrodia elata | 26.280 | |
| SRR5643661 | five period of Gastrodia elata | 29.000 | |
| SRR5643662 | five period of Gastrodia elata | 25.070 | |
| SRR5643663 | five period of Gastrodia elata | 27.400 | |
| SRR5643664 | five period of Gastrodia elata | 26.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.750 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 35.640 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 30.490 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 30.620 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 26.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.600 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.700 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 32.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 32.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.15 |
| Juven | Juvenile tuber | 31.66 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.74 | |
| Mother_Juven | Mother tuber of Juvenile | 20.74 |