Detail information of GWHGAAEX009605/evm.TU.scaffold_25.223
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116750792|ref|YP_847479.1| | 2.00E-50 | glutamine cyclotransferase [Syntrophobacter fumaroxidans MPOB] |
| nr | gi|694998607|ref|XP_009405359.1| | 1.34E-108 | PREDICTED: glutaminyl-peptide cyclotransferase [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q84WV9|QPCT_ARATH | 8.00E-91 | Glutaminyl-peptide cyclotransferase |
| trEMBL | tr|M0RZ05|M0RZ05_MUSAM | 3.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P11460_001} |
| TAIR | AT4G25720 | 2.00E-82 | glutaminyl cyclase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000030 | 6710095 | 6789962 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009605
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05096.11 | Glu_cyclase_2 | 64 | 273 | 2.80E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0017186 | Biological Process | peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase |
| GO:0016603 | Molecular Function | glutaminyl-peptide cyclotransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 32.440 |
| SRR2545915 | Juvenile tuber | 42.870 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 45.450 |
| SRR5643514 | five period of Gastrodia elata | 53.870 | |
| SRR5643515 | five period of Gastrodia elata | 48.430 | |
| SRR5643524 | five period of Gastrodia elata | 53.310 | |
| SRR5643525 | five period of Gastrodia elata | 25.890 | |
| SRR5643528 | five period of Gastrodia elata | 30.380 | |
| SRR5643658 | five period of Gastrodia elata | 25.070 | |
| SRR5643659 | five period of Gastrodia elata | 32.220 | |
| SRR5643660 | five period of Gastrodia elata | 39.940 | |
| SRR5643661 | five period of Gastrodia elata | 37.260 | |
| SRR5643662 | five period of Gastrodia elata | 29.640 | |
| SRR5643663 | five period of Gastrodia elata | 32.620 | |
| SRR5643664 | five period of Gastrodia elata | 29.200 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.040 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 53.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 37.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 28.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.600 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.160 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.740 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 38.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 32.840 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 48.980 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 48.980 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.69 |
| Juven | Juvenile tuber | 29.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.03 | |
| Mother_Juven | Mother tuber of Juvenile | 20.06 |