Detail information of GWHGAAEX009614/evm.TU.scaffold_25.237


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16032.00E-55Copper chaperone
nrgi|743868209|ref|XP_010905511.1|8.59E-96PREDICTED: FK506-binding protein 5-like [Elaeis guineensis]
Swissprottr|O82089|CCH_ARATH3.00E-06Copper transport protein CCH
trEMBLtr|M0TWI3|M0TWI3_MUSAM6.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P01260_001}
TAIRAT5G635302.00E-55farnesylated protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003071835587186375-
Transcript Sequence

Network for GWHGAAEX009614

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA641191.20E-10
PF00403.25HMA1612172.50E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.690
SRR2545915Juvenile tuber62.900
SRP108465SRR5643513five period of Gastrodia elata78.470
SRR5643514five period of Gastrodia elata101.860
SRR5643515five period of Gastrodia elata78.170
SRR5643524five period of Gastrodia elata106.280
SRR5643525five period of Gastrodia elata114.370
SRR5643528five period of Gastrodia elata97.260
SRR5643658five period of Gastrodia elata179.560
SRR5643659five period of Gastrodia elata46.200
SRR5643660five period of Gastrodia elata35.110
SRR5643661five period of Gastrodia elata40.960
SRR5643662five period of Gastrodia elata33.670
SRR5643663five period of Gastrodia elata33.800
SRR5643664five period of Gastrodia elata31.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_176.460
SRR6049655Rhizomagastrodiae_C368-T10_good_144.480
SRR6049656Rhizomagastrodiae_C368-T07_good_168.840
SRR6049657Rhizomagastrodiae_C368-T07_good_164.370
SRR6049658Rhizomagastrodiae_C368-T04_good_140.770
SRR6049659Rhizomagastrodiae_C368-T04_good_122.010
SRR6049660Rhizomagastrodiae_C368-T01_good_136.710
SRR6049661Rhizomagastrodiae_C368-T04_good_150.690
SRR6049662Rhizomagastrodiae_C368-T01_good_184.340
SRR6049663Rhizomagastrodiae_C368-T01_good_143.360
SRR6049664Rhizomagastrodiae_C368-T10_good_151.790
SRR6049665Rhizomagastrodiae_C368-T10_good_151.790
SRP279888GastroGastrodia elata tuber 26.49
JuvenJuvenile tuber19.65
Mother_GastroMother tuber of Gastrodia elata 17.25
Mother_JuvenMother tuber of Juvenile 9.75