Detail information of GWHGAAEX009621/evm.TU.scaffold_250.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672123418|ref|XP_008785071.1|5.84E-57PREDICTED: uncharacterized protein LOC103703834 isoform X2 [Phoenix dactylifera]
trEMBLtr|A0A061E5R3|A0A061E5R3_THECC7.00E-43RNase H family protein, putative isoform 2 {ECO:0000313|EMBL:EOY00360.1}
TAIRAT3G014109.00E-34Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000250165677196490+
Transcript Sequence

Network for GWHGAAEX009621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.730
SRR2545915Juvenile tuber10.020
SRP108465SRR5643513five period of Gastrodia elata15.140
SRR5643514five period of Gastrodia elata14.980
SRR5643515five period of Gastrodia elata13.040
SRR5643524five period of Gastrodia elata15.410
SRR5643525five period of Gastrodia elata4.330
SRR5643528five period of Gastrodia elata3.420
SRR5643658five period of Gastrodia elata4.010
SRR5643659five period of Gastrodia elata9.830
SRR5643660five period of Gastrodia elata12.810
SRR5643661five period of Gastrodia elata11.450
SRR5643662five period of Gastrodia elata14.490
SRR5643663five period of Gastrodia elata10.290
SRR5643664five period of Gastrodia elata12.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.890
SRR6049655Rhizomagastrodiae_C368-T10_good_133.390
SRR6049656Rhizomagastrodiae_C368-T07_good_120.080
SRR6049657Rhizomagastrodiae_C368-T07_good_116.900
SRR6049658Rhizomagastrodiae_C368-T04_good_118.030
SRR6049659Rhizomagastrodiae_C368-T04_good_118.750
SRR6049660Rhizomagastrodiae_C368-T01_good_118.590
SRR6049661Rhizomagastrodiae_C368-T04_good_123.190
SRR6049662Rhizomagastrodiae_C368-T01_good_120.540
SRR6049663Rhizomagastrodiae_C368-T01_good_117.290
SRR6049664Rhizomagastrodiae_C368-T10_good_127.630
SRR6049665Rhizomagastrodiae_C368-T10_good_127.630
SRP279888GastroGastrodia elata tuber 25.36
JuvenJuvenile tuber25.37
Mother_GastroMother tuber of Gastrodia elata 19.82
Mother_JuvenMother tuber of Juvenile 21.98