Detail information of GWHGAAEX009625/evm.TU.scaffold_250.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743809067|ref|XP_010928500.1|0PREDICTED: uncharacterized protein LOC105050248 [Elaeis guineensis]
trEMBLtr|M0SMJ6|M0SMJ6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P09790_001}
TAIRAT5G388800Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000250412639460079+
Transcript Sequence

Network for GWHGAAEX009625

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14817.5HAUS5127603.10E-258
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0051225Biological Processspindle assembly
GO:0070652Cellular ComponentHAUS complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.970
SRR2545915Juvenile tuber14.570
SRP108465SRR5643513five period of Gastrodia elata17.490
SRR5643514five period of Gastrodia elata16.690
SRR5643515five period of Gastrodia elata16.340
SRR5643524five period of Gastrodia elata20.560
SRR5643525five period of Gastrodia elata7.310
SRR5643528five period of Gastrodia elata7.210
SRR5643658five period of Gastrodia elata8.000
SRR5643659five period of Gastrodia elata18.390
SRR5643660five period of Gastrodia elata15.720
SRR5643661five period of Gastrodia elata14.880
SRR5643662five period of Gastrodia elata11.100
SRR5643663five period of Gastrodia elata12.720
SRR5643664five period of Gastrodia elata11.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.140
SRR6049655Rhizomagastrodiae_C368-T10_good_19.740
SRR6049656Rhizomagastrodiae_C368-T07_good_115.310
SRR6049657Rhizomagastrodiae_C368-T07_good_114.040
SRR6049658Rhizomagastrodiae_C368-T04_good_114.690
SRR6049659Rhizomagastrodiae_C368-T04_good_116.110
SRR6049660Rhizomagastrodiae_C368-T01_good_112.880
SRR6049661Rhizomagastrodiae_C368-T04_good_112.930
SRR6049662Rhizomagastrodiae_C368-T01_good_116.950
SRR6049663Rhizomagastrodiae_C368-T01_good_118.770
SRR6049664Rhizomagastrodiae_C368-T10_good_118.500
SRR6049665Rhizomagastrodiae_C368-T10_good_118.500
SRP279888GastroGastrodia elata tuber 21.15
JuvenJuvenile tuber43.61
Mother_GastroMother tuber of Gastrodia elata 29.43
Mother_JuvenMother tuber of Juvenile 37.40