Gene detail

Detail information of GWHGAAEX009637/evm.TU.scaffold_251.2

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743823495\|ref\|XP_010932543.1\|	PREDICTED: microtubule-associated protein 70-2-like isoform X2 [Elaeis guineensis]
Swissprot	tr\|Q8L7S4\|MP702_ARATH	Microtubule-associated protein 70-2
trEMBL	tr\|M0RJ70\|M0RJ70_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P17950_001}
TAIR	AT1G68060	microtubule-associated proteins 70-1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000261	43629	68510	+

Transcript Sequence
>GWHTAAEX009637 AGAAATCAAGCCTCAAATGTATTCAAAATCAGCCTTAATCTATGGTTTCAATGTGAAGATCACGGGATATTTGCTAGGAAATAACAGGTAATCTTACCGATAGGTGGCGACAGCTAAATCATACTTCAGCTCGAGGCAAAGGCCGCTTTTCGGGGGATCACAGCTCTACTCACTCTCAACTTCAAAGTTTTTTAAAATTATATTTAATTTTTTTGCTTTTTCCACTTATAACAGCCTCTCTTCCACTGAAAAGCTATTATGCTGCAGTTCAGGTTACACTAGATACAGACGGTGGCAGATCGAGTGAGGTTAGAAGGAAACAAGGGTTTGTTCAAGATCTTGTTTCTTTATTAGTTGATGAATCGAAAGCGTCAGAGGAAAGTAAATTGACGGTCCAAGGGAGCAAAGCCTAGGTCTTGGAGCCTGAACAGGAACTAGGCATTTCGGTTTCTGCAGTTTTCTCTGTTAGTTTTGTTTTTTGGTTTCATTTGGATGTAAGTTAATCGGATCTGGAATGGCGGATCTGTGCGGTGGAGACGGAGGGGAAGGATTTAAACCTGAGTCCAGCATCGGAGGCAATGCAGCTTCTCCGGCATTAGCACCAGCGCCGCTATTAGTATTACCTTCTGTGCTAACTTCATCGGCTTCTTTTAAGGGAGAAGGCAAGCCTTCTGGGAAAGAGAAACGGAGGCCGGTGATAAGGCCGAGCCTTGATGCAGAGGAGTTTATAAATTTGCTTCACGGATCTGATCCGGTCAAAGTGGAGCTCAATCGGCTGGAGAATGAAGTTAGAGACAAAGACCGGGAGTTGGGCGATGCCCACGCTGAAATAAAAGCGCTGAAGCTCTCAGAGCGCGCTAGAGAGAAGGCTGTTGAAGAGATTACAGAAGAGATGACCAAGTTGGATGAGAAGCTCAAGCTAACTGAGTCTCTCTTGGAGTCTAAGAATCTTGAAATCAAGAAGATAAATGATGAGAAGAAAGCATCCATGGCTGCTCAATTTGCAGCAGAAGCTACACTTAGACGGGTTCATGCTGCTCAAAAAGATGATGATATGCCTCCCATTGAAGCTATCCTTGCACCCCTTGAAGCCGAACTCAAGCTGGCCCGTCAAGAGATTACAAAGCTGCAAGATGACAACAGGGCGTTAGACCGTCTTACTAAATCAAAGGAAGCTGCACTGCTTGAAGCAGAACGAACTGTTCAAATTGCTTTGGCAAAAGCTTCTATGGTAGATGATTTACAAAACAAAAATCAAGAATTAATTAAACAGATTGAGATTTGCCAGGAAGAAAACAAGATCTTGGATAAAATGCATCGACAAAAAGTTTCAGAGGTTGAAAAGCTCAGCCAGACTGTGCGAGAGCTAGAGGAAGCTGTTCTTGCCGGTGGTGCAGCGGCAAATGCTGTGAGAGATTATCAGCGGAAAGTTCAAGAGATGAATGATGAGAGGAAGACCCTTGATAGAGAACTGGCACGTGCAAAAGTTTCTGCCAACAGGGTTGCAGTAGTTGTTGCAAATGAATGGAAAGATGCAAATGACAAAGTAATGCCTGTAAAACAATGGCTTGATGACCGGAGATTTATGCAGGGAGAAATGCAACAGCTGCGAGATAAACTTTCTATTGCAGAACGCACTGCTAAATATGAAGCTCAGCTTAAGGAAAAATATCATTTAAGATTGAAAGTACTTGAAGAAAGTTTGAGAATGCCTTCAAGTGGTGTTCAACGTACAAATGGAGAGAGTAGGAGTGTGAGCAATGGTCCTTCACGAAGACAGTCATTGGGAGGCGCTGATAATAATTCAAAGGCTTCCTCCAATGGTATTCTAACTAGGAGGACATCATCCTTCCAGCTTAGATCTTCTCTTTCCAGTGGCTCTAGCATGGTGCTGAAGCATGCAAAAGGAACATCAAAGTCGTTTGATGGTGGAAGCAGGTCATATGAACGTAATAAAGTACTTGCCAATGGGATTACTTATTCACTCAATCAATCTACTGATGAAATGAGGGAAGGGGATGCCCGTAGTAATTGGAAGGATGGTTTAGAAGAGAAGTCAGATGAACTCCGTGCTGAAGATGCAGATGACTCTGTTTCTGGATTGTTGTATGATATGCTACAGAAAGAAGTGATTACTCTTAGAAAAGCATGCCATGAGAAAGACCAAAGCTTGAAGGACAAGGATGATGCCATTGAGATGCTGGCAAAGAAAGTAGATACGTTAACAAAGGCAATGGAAGTAGAAGCCAAGAAAATGAGAAGGGAGGTGGCTGCCATGGAGAAGGAGGTTGCTTCCATGCGAATTGACAAGGAGCAAGATAATAGGGCTAAACGACTTGCTAGTTCCAAAATTCCGGCTAGCACTTCACAGCTTCTTCCTGGGAGAAATGTGCCTAGAAGTGGTTTGATGCGCAATCTTCAATGAGGGAGGGTATATGGAGAGATATATACCAGGATCAAGACTTTCTCAAGCCCCCTCCCCTCTCCTTACCCTTGACTCTACATTGAGGTTCAATTAAGGTAAAAAAGGATATGAAGAGATGAAGATGGGTTTGCAAATGACAGCTTGGCCAATGGCATAGTAGTATATTGTTGTAGCTGCTGTTTTTACTATAATTACTATTATATAGGGTGATTGATGCTGAGGACGCTAACTTTTTTTTTTAATCGTTTTTGTCCTGCTGTTTGATCACAACTTTGGCTGTATAGGTTTCTTTTAGCCCTCTGTAATTTGAGCAGCATCTCTCATGATTTGTTTTTTTTTTTGGCATTCTGGGCTGTGAATATTTTTATAATTTCAGATAGTCCTGCTGTTGCTTTCACTCAGGGTTTGGTTGGTTGGTATCTTTAGTGCTTTAT

Network for GWHGAAEX009637

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07058.10	MAP70	69	619	2.70E-291

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007010	Biological Process	cytoskeleton organization
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.420
SRP064423	SRR2545915	Juvenile tuber	29.730
SRP108465	SRR5643513	five period of Gastrodia elata	30.030
	SRR5643514	five period of Gastrodia elata	34.440
	SRR5643515	five period of Gastrodia elata	27.540
	SRR5643524	five period of Gastrodia elata	31.060
	SRR5643525	five period of Gastrodia elata	22.230
	SRR5643528	five period of Gastrodia elata	16.670
	SRR5643658	five period of Gastrodia elata	21.830
	SRR5643659	five period of Gastrodia elata	28.450
	SRR5643660	five period of Gastrodia elata	27.500
	SRR5643661	five period of Gastrodia elata	29.210
	SRR5643662	five period of Gastrodia elata	25.500
	SRR5643663	five period of Gastrodia elata	28.220
	SRR5643664	five period of Gastrodia elata	27.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.860
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	28.010
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	35.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	28.360
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	28.360
SRP279888	Gastro	Gastrodia elata tuber	26.77
	Juven	Juvenile tuber	33.26
	Mother_Gastro	Mother tuber of Gastrodia elata	17.45
	Mother_Juven	Mother tuber of Juvenile	21.23