Detail information of GWHGAAEX009664/evm.TU.scaffold_251.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186683200|ref|YP_001866396.1|1.00E-36signal transduction protein [Nostoc punctiforme PCC 73102]
KOGKOG00273.00E-93Calmodulin and related proteins (EF-Hand superfamily)
nrgi|350536977|ref|NP_001234786.1|6.07E-96calmodulin [Solanum lycopersicum]
Swissprottr|P27161|CALM_SOLLC3.00E-98Calmodulin
trEMBLtr|Q711J0|Q711J0_SOLCO2.00E-96Putative calmodulin {ECO:0000313|EMBL:CAC84563.1}
TAIRAT3G438103.00E-93calmodulin 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000261569257576122+
Transcript Sequence

Network for GWHGAAEX009664

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_713732.00E-14
PF13499.5EF-hand_7831462.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02183CALM Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathway - plantmap04016
Apelin signaling pathwaymap04371
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
GnRH signaling pathwaymap04912
Estrogen signaling pathwaymap04915
Oxytocin signaling pathwaymap04921
Melanogenesismap04916
Renin secretionmap04924
Aldosterone synthesis and secretionmap04925
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Salivary secretionmap04970
Gastric acid secretionmap04971
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Neurotrophin signaling pathwaymap04722
Phototransductionmap04744
Phototransduction - flymap04745
Olfactory transductionmap04740
Inflammatory mediator regulation of TRP channelsmap04750
Circadian entrainmentmap04713
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms314.050
SRR2545915Juvenile tuber467.860
SRP108465SRR5643513five period of Gastrodia elata367.150
SRR5643514five period of Gastrodia elata425.400
SRR5643515five period of Gastrodia elata364.920
SRR5643524five period of Gastrodia elata392.790
SRR5643525five period of Gastrodia elata317.020
SRR5643528five period of Gastrodia elata245.230
SRR5643658five period of Gastrodia elata276.950
SRR5643659five period of Gastrodia elata432.540
SRR5643660five period of Gastrodia elata403.530
SRR5643661five period of Gastrodia elata440.260
SRR5643662five period of Gastrodia elata366.120
SRR5643663five period of Gastrodia elata427.310
SRR5643664five period of Gastrodia elata416.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1448.210
SRR6049655Rhizomagastrodiae_C368-T10_good_1684.870
SRR6049656Rhizomagastrodiae_C368-T07_good_1498.860
SRR6049657Rhizomagastrodiae_C368-T07_good_1427.040
SRR6049658Rhizomagastrodiae_C368-T04_good_1417.390
SRR6049659Rhizomagastrodiae_C368-T04_good_1389.980
SRR6049660Rhizomagastrodiae_C368-T01_good_1439.020
SRR6049661Rhizomagastrodiae_C368-T04_good_1426.200
SRR6049662Rhizomagastrodiae_C368-T01_good_1421.800
SRR6049663Rhizomagastrodiae_C368-T01_good_1453.710
SRR6049664Rhizomagastrodiae_C368-T10_good_1481.780
SRR6049665Rhizomagastrodiae_C368-T10_good_1481.780
SRP279888GastroGastrodia elata tuber 428.96
JuvenJuvenile tuber707.60
Mother_GastroMother tuber of Gastrodia elata 165.38
Mother_JuvenMother tuber of Juvenile 245.13