Detail information of GWHGAAEX009667/evm.TU.scaffold_251.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17213.00E-101FOG: Zn-finger
nrgi|643721398|gb|KDP31536.1|1.97E-109hypothetical protein JCGZ_15388 [Jatropha curcas]
Swissprottr|Q9C9X7|IDD14_ARATH9.00E-102Protein indeterminate-domain 14 {ECO:0000303|PubMed:16784536}
trEMBLtr|A0A067K5N0|A0A067K5N0_JATCU7.00E-110Uncharacterized protein {ECO:0000313|EMBL:KDP31536.1}
TAIRAT1G681303.00E-101indeterminate(ID)-domain 14

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000261646344648762-
Transcript Sequence

Network for GWHGAAEX009667

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.25zf-C2H247691.10E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.440
SRR2545915Juvenile tuber0.170
SRP108465SRR5643513five period of Gastrodia elata5.790
SRR5643514five period of Gastrodia elata5.140
SRR5643515five period of Gastrodia elata3.670
SRR5643524five period of Gastrodia elata3.250
SRR5643525five period of Gastrodia elata4.320
SRR5643528five period of Gastrodia elata1.640
SRR5643658five period of Gastrodia elata0.180
SRR5643659five period of Gastrodia elata0.190
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.140
SRR5643662five period of Gastrodia elata0.410
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.060
SRR6049655Rhizomagastrodiae_C368-T10_good_18.200
SRR6049656Rhizomagastrodiae_C368-T07_good_16.810
SRR6049657Rhizomagastrodiae_C368-T07_good_14.410
SRR6049658Rhizomagastrodiae_C368-T04_good_17.500
SRR6049659Rhizomagastrodiae_C368-T04_good_13.960
SRR6049660Rhizomagastrodiae_C368-T01_good_13.040
SRR6049661Rhizomagastrodiae_C368-T04_good_13.390
SRR6049662Rhizomagastrodiae_C368-T01_good_15.290
SRR6049663Rhizomagastrodiae_C368-T01_good_15.520
SRR6049664Rhizomagastrodiae_C368-T10_good_118.880
SRR6049665Rhizomagastrodiae_C368-T10_good_118.880
SRP279888GastroGastrodia elata tuber 0.28
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 18.59
Mother_JuvenMother tuber of Juvenile 5.06