Detail information of GWHGAAEX009670/evm.TU.scaffold_251.40
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383452784|ref|YP_005366773.1| | 7.00E-18 | serine/threonine protein kinase [Corallococcus coralloides DSM 2259] |
| KOG | KOG0667 | 0 | Dual-specificity tyrosine-phosphorylation regulated kinase |
| nr | gi|743850748|ref|XP_010939962.1| | 0 | PREDICTED: uncharacterized protein LOC105058664 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|P51567|AFC2_ARATH | 4.00E-44 | Serine/threonine-protein kinase AFC2 |
| trEMBL | tr|V4T336|V4T336_9ROSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESR54613.1} |
| TAIR | AT1G73460 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000261 | 688280 | 717172 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009670
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 820 | 1122 | 3.40E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_DYRK-PRP4 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.640 |
| SRR2545915 | Juvenile tuber | 16.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.060 |
| SRR5643514 | five period of Gastrodia elata | 14.370 | |
| SRR5643515 | five period of Gastrodia elata | 12.320 | |
| SRR5643524 | five period of Gastrodia elata | 15.640 | |
| SRR5643525 | five period of Gastrodia elata | 9.190 | |
| SRR5643528 | five period of Gastrodia elata | 9.070 | |
| SRR5643658 | five period of Gastrodia elata | 7.590 | |
| SRR5643659 | five period of Gastrodia elata | 14.370 | |
| SRR5643660 | five period of Gastrodia elata | 14.730 | |
| SRR5643661 | five period of Gastrodia elata | 12.750 | |
| SRR5643662 | five period of Gastrodia elata | 12.320 | |
| SRR5643663 | five period of Gastrodia elata | 11.610 | |
| SRR5643664 | five period of Gastrodia elata | 12.250 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.220 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.340 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.300 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.030 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.66 |
| Juven | Juvenile tuber | 17.25 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.61 | |
| Mother_Juven | Mother tuber of Juvenile | 16.93 |