Detail information of GWHGAAEX009676/evm.TU.scaffold_252.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32132.00E-120Transcription factor IIB
nrgi|672167047|ref|XP_008803469.1|4.95E-128PREDICTED: UPF0468 protein CG5343 [Phoenix dactylifera]
Swissprottr|A8IU92|CFA20_CHLRE1.00E-116Cilia- and flagella-associated protein 20
trEMBLtr|B3TLX8|B3TLX8_ELAGV6.00E-128Transcription factor IIB {ECO:0000313|EMBL:ACF06559.1}
TAIRAT3G123002.00E-120Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000247186057211628+
Transcript Sequence

Network for GWHGAAEX009676

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05018.12DUF66711841.80E-89
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.060
SRR2545915Juvenile tuber36.560
SRP108465SRR5643513five period of Gastrodia elata32.840
SRR5643514five period of Gastrodia elata24.040
SRR5643515five period of Gastrodia elata30.960
SRR5643524five period of Gastrodia elata27.160
SRR5643525five period of Gastrodia elata48.330
SRR5643528five period of Gastrodia elata50.850
SRR5643658five period of Gastrodia elata54.850
SRR5643659five period of Gastrodia elata26.430
SRR5643660five period of Gastrodia elata25.520
SRR5643661five period of Gastrodia elata27.190
SRR5643662five period of Gastrodia elata24.640
SRR5643663five period of Gastrodia elata28.470
SRR5643664five period of Gastrodia elata28.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.910
SRR6049655Rhizomagastrodiae_C368-T10_good_122.300
SRR6049656Rhizomagastrodiae_C368-T07_good_132.590
SRR6049657Rhizomagastrodiae_C368-T07_good_138.490
SRR6049658Rhizomagastrodiae_C368-T04_good_137.280
SRR6049659Rhizomagastrodiae_C368-T04_good_140.880
SRR6049660Rhizomagastrodiae_C368-T01_good_133.990
SRR6049661Rhizomagastrodiae_C368-T04_good_136.870
SRR6049662Rhizomagastrodiae_C368-T01_good_129.120
SRR6049663Rhizomagastrodiae_C368-T01_good_131.560
SRR6049664Rhizomagastrodiae_C368-T10_good_129.130
SRR6049665Rhizomagastrodiae_C368-T10_good_129.130
SRP279888GastroGastrodia elata tuber 28.63
JuvenJuvenile tuber33.96
Mother_GastroMother tuber of Gastrodia elata 42.28
Mother_JuvenMother tuber of Juvenile 39.52