Detail information of GWHGAAEX009677/evm.TU.scaffold_252.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG43741.00E-32RNA-binding protein Bicaudal-C
nrgi|672134127|ref|XP_008790708.1|4.07E-57PREDICTED: uncharacterized protein LOC103707821 [Phoenix dactylifera]
trEMBLtr|M0T1H2|M0T1H2_MUSAM2.00E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P24970_001}
TAIRAT3G488001.00E-32Sterile alpha motif (SAM) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000247217896231242+
Transcript Sequence

Network for GWHGAAEX009677

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07647.16SAM_21602155.00E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.370
SRR2545915Juvenile tuber17.290
SRP108465SRR5643513five period of Gastrodia elata24.090
SRR5643514five period of Gastrodia elata19.670
SRR5643515five period of Gastrodia elata23.910
SRR5643524five period of Gastrodia elata19.280
SRR5643525five period of Gastrodia elata20.040
SRR5643528five period of Gastrodia elata21.780
SRR5643658five period of Gastrodia elata18.770
SRR5643659five period of Gastrodia elata26.080
SRR5643660five period of Gastrodia elata23.190
SRR5643661five period of Gastrodia elata28.170
SRR5643662five period of Gastrodia elata33.950
SRR5643663five period of Gastrodia elata27.710
SRR5643664five period of Gastrodia elata23.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.250
SRR6049655Rhizomagastrodiae_C368-T10_good_121.310
SRR6049656Rhizomagastrodiae_C368-T07_good_119.180
SRR6049657Rhizomagastrodiae_C368-T07_good_122.220
SRR6049658Rhizomagastrodiae_C368-T04_good_119.240
SRR6049659Rhizomagastrodiae_C368-T04_good_122.030
SRR6049660Rhizomagastrodiae_C368-T01_good_117.940
SRR6049661Rhizomagastrodiae_C368-T04_good_118.050
SRR6049662Rhizomagastrodiae_C368-T01_good_117.510
SRR6049663Rhizomagastrodiae_C368-T01_good_116.110
SRR6049664Rhizomagastrodiae_C368-T10_good_119.820
SRR6049665Rhizomagastrodiae_C368-T10_good_119.820
SRP279888GastroGastrodia elata tuber 26.98
JuvenJuvenile tuber38.57
Mother_GastroMother tuber of Gastrodia elata 22.85
Mother_JuvenMother tuber of Juvenile 30.52