Detail information of GWHGAAEX009682/evm.TU.scaffold_252.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521469202|ref|YP_008156795.1|3.00E-93aspartate kinase [Sorangium cellulosum So0157-2]
KOGKOG04560Aspartate kinase
nrgi|672114426|ref|XP_008776937.1|0PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9LYU8|AK1_ARATH0Aspartokinase 1, chloroplastic (Precursor)
trEMBLtr|A0A068V8D4|A0A068V8D4_COFCA0Aspartokinase {ECO:0000256|RuleBase:RU003448}
TAIRAT5G132800aspartate kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000247312984331698+
Transcript Sequence

Network for GWHGAAEX009682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00696.27AA_kinase883691.20E-48
PF01842.24ACT4064711.70E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00928lysC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Lysine biosynthesismap00300
Monobactam biosynthesismap00261

Gene Ontology

GO term OntologyName
GO:0008652Biological Processcellular amino acid biosynthetic process
GO:0004072Molecular Functionaspartate kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.790
SRR2545915Juvenile tuber34.840
SRP108465SRR5643513five period of Gastrodia elata20.720
SRR5643514five period of Gastrodia elata18.370
SRR5643515five period of Gastrodia elata23.640
SRR5643524five period of Gastrodia elata20.810
SRR5643525five period of Gastrodia elata23.030
SRR5643528five period of Gastrodia elata22.840
SRR5643658five period of Gastrodia elata17.200
SRR5643659five period of Gastrodia elata28.120
SRR5643660five period of Gastrodia elata20.750
SRR5643661five period of Gastrodia elata30.450
SRR5643662five period of Gastrodia elata32.100
SRR5643663five period of Gastrodia elata29.150
SRR5643664five period of Gastrodia elata19.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.180
SRR6049655Rhizomagastrodiae_C368-T10_good_115.510
SRR6049656Rhizomagastrodiae_C368-T07_good_124.100
SRR6049657Rhizomagastrodiae_C368-T07_good_126.810
SRR6049658Rhizomagastrodiae_C368-T04_good_125.650
SRR6049659Rhizomagastrodiae_C368-T04_good_131.460
SRR6049660Rhizomagastrodiae_C368-T01_good_126.550
SRR6049661Rhizomagastrodiae_C368-T04_good_129.470
SRR6049662Rhizomagastrodiae_C368-T01_good_130.900
SRR6049663Rhizomagastrodiae_C368-T01_good_128.880
SRR6049664Rhizomagastrodiae_C368-T10_good_119.660
SRR6049665Rhizomagastrodiae_C368-T10_good_119.660
SRP279888GastroGastrodia elata tuber 20.00
JuvenJuvenile tuber28.91
Mother_GastroMother tuber of Gastrodia elata 23.36
Mother_JuvenMother tuber of Juvenile 24.43