Detail information of GWHGAAEX009685/evm.TU.scaffold_252.21
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|156937568|ref|YP_001435364.1| | 9.00E-22 | glycosyl transferase family protein [Ignicoccus hospitalis KIN4/I] |
| KOG | KOG2788 | 0 | Glycosyltransferase |
| nr | gi|743785438|ref|XP_010921906.1| | 0 | PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Elaeis guineensis] |
| trEMBL | tr|W9RIT7|W9RIT7_9ROSA | 0 | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase {ECO:0000313|EMBL:EXB93955.1} |
| TAIR | AT3G57220 | 0 | Glycosyl transferase family 4 protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000247 | 421034 | 454650 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009685
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00953.20 | Glycos_transf_4 | 151 | 322 | 4.70E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01001 | ALG7 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006488 | Biological Process | dolichol-linked oligosaccharide biosynthetic process |
| GO:0006487 | Biological Process | protein N-linked glycosylation |
| GO:0003975 | Molecular Function | UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity |
| GO:0008963 | Molecular Function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.130 |
| SRR2545915 | Juvenile tuber | 13.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.670 |
| SRR5643514 | five period of Gastrodia elata | 22.140 | |
| SRR5643515 | five period of Gastrodia elata | 23.930 | |
| SRR5643524 | five period of Gastrodia elata | 25.220 | |
| SRR5643525 | five period of Gastrodia elata | 32.250 | |
| SRR5643528 | five period of Gastrodia elata | 42.600 | |
| SRR5643658 | five period of Gastrodia elata | 43.810 | |
| SRR5643659 | five period of Gastrodia elata | 23.410 | |
| SRR5643660 | five period of Gastrodia elata | 23.690 | |
| SRR5643661 | five period of Gastrodia elata | 24.140 | |
| SRR5643662 | five period of Gastrodia elata | 25.230 | |
| SRR5643663 | five period of Gastrodia elata | 24.740 | |
| SRR5643664 | five period of Gastrodia elata | 24.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.120 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.610 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.900 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.720 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.740 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.570 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.570 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 36.64 |
| Juven | Juvenile tuber | 24.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 35.26 | |
| Mother_Juven | Mother tuber of Juvenile | 41.17 |