Detail information of GWHGAAEX009693/evm.TU.scaffold_253.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743821703|ref|XP_010932105.1|3.50E-124PREDICTED: putative lysozyme-like protein [Elaeis guineensis]
Swissprottr|Q9S7C9|ESCA_ARATH3.00E-13Putative DNA-binding protein ESCAROLA
trEMBLtr|M5WMF5|M5WMF5_PRUPE6.00E-112Uncharacterized protein {ECO:0000313|EMBL:EMJ10458.1}
TAIRAT2G336202.00E-88AT hook motif DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000249416171424474+
Transcript Sequence

Network for GWHGAAEX009693

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03479.14DUF2962353487.80E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms107.180
SRR2545915Juvenile tuber79.650
SRP108465SRR5643513five period of Gastrodia elata80.810
SRR5643514five period of Gastrodia elata79.700
SRR5643515five period of Gastrodia elata83.610
SRR5643524five period of Gastrodia elata74.740
SRR5643525five period of Gastrodia elata89.290
SRR5643528five period of Gastrodia elata85.820
SRR5643658five period of Gastrodia elata85.630
SRR5643659five period of Gastrodia elata101.940
SRR5643660five period of Gastrodia elata103.150
SRR5643661five period of Gastrodia elata86.700
SRR5643662five period of Gastrodia elata96.400
SRR5643663five period of Gastrodia elata93.150
SRR5643664five period of Gastrodia elata100.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_190.000
SRR6049655Rhizomagastrodiae_C368-T10_good_159.920
SRR6049656Rhizomagastrodiae_C368-T07_good_182.520
SRR6049657Rhizomagastrodiae_C368-T07_good_1111.300
SRR6049658Rhizomagastrodiae_C368-T04_good_1120.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1128.800
SRR6049660Rhizomagastrodiae_C368-T01_good_1113.000
SRR6049661Rhizomagastrodiae_C368-T04_good_1108.820
SRR6049662Rhizomagastrodiae_C368-T01_good_184.660
SRR6049663Rhizomagastrodiae_C368-T01_good_191.690
SRR6049664Rhizomagastrodiae_C368-T10_good_179.430
SRR6049665Rhizomagastrodiae_C368-T10_good_179.430
SRP279888GastroGastrodia elata tuber 141.54
JuvenJuvenile tuber104.46
Mother_GastroMother tuber of Gastrodia elata 74.87
Mother_JuvenMother tuber of Juvenile 76.69