Detail information of GWHGAAEX009701/evm.TU.scaffold_254.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695023634|ref|XP_009399000.1|6.05E-167PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q7XZZ3|BAHL1_ORYSJ5.00E-147Probable E3 ubiquitin-protein ligase BAH1-like 1
trEMBLtr|M0SV47|M0SV47_MUSAM2.00E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02680_001}
TAIRAT2G389201.00E-98SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000254274639290396+
Transcript Sequence

Network for GWHGAAEX009701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13445.5zf-RING_UBOX2312772.30E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.300
SRR2545915Juvenile tuber3.040
SRP108465SRR5643513five period of Gastrodia elata1.070
SRR5643514five period of Gastrodia elata0.670
SRR5643515five period of Gastrodia elata1.250
SRR5643524five period of Gastrodia elata1.100
SRR5643525five period of Gastrodia elata2.560
SRR5643528five period of Gastrodia elata1.890
SRR5643658five period of Gastrodia elata2.240
SRR5643659five period of Gastrodia elata0.510
SRR5643660five period of Gastrodia elata0.240
SRR5643661five period of Gastrodia elata0.080
SRR5643662five period of Gastrodia elata0.320
SRR5643663five period of Gastrodia elata0.490
SRR5643664five period of Gastrodia elata0.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.220
SRR6049655Rhizomagastrodiae_C368-T10_good_10.910
SRR6049656Rhizomagastrodiae_C368-T07_good_13.090
SRR6049657Rhizomagastrodiae_C368-T07_good_11.620
SRR6049658Rhizomagastrodiae_C368-T04_good_14.060
SRR6049659Rhizomagastrodiae_C368-T04_good_13.250
SRR6049660Rhizomagastrodiae_C368-T01_good_11.540
SRR6049661Rhizomagastrodiae_C368-T04_good_14.850
SRR6049662Rhizomagastrodiae_C368-T01_good_13.270
SRR6049663Rhizomagastrodiae_C368-T01_good_12.430
SRR6049664Rhizomagastrodiae_C368-T10_good_11.650
SRR6049665Rhizomagastrodiae_C368-T10_good_11.650
SRP279888GastroGastrodia elata tuber 4.46
JuvenJuvenile tuber0.34
Mother_GastroMother tuber of Gastrodia elata 5.75
Mother_JuvenMother tuber of Juvenile 0.98