Detail information of GWHGAAEX009709/evm.TU.scaffold_254.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1187 | 3.00E-54 | Serine/threonine protein kinase |
| nr | gi|672163610|ref|XP_008801661.1| | 1.34E-112 | PREDICTED: probable receptor-like protein kinase At1g49730 isoform X3 [Phoenix dactylifera] |
| Swissprot | tr|Q9FX99|Y1497_ARATH | 1.00E-49 | Probable receptor-like protein kinase At1g49730 (Precursor) |
| trEMBL | tr|M0TFM4|M0TFM4_MUSAM | 4.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P07840_001} |
| TAIR | AT3G19300 | 3.00E-54 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000254 | 624210 | 638414 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009709
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 61 | 182 | 8.10E-12 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_URK-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.730 |
| SRR2545915 | Juvenile tuber | 14.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.700 |
| SRR5643514 | five period of Gastrodia elata | 10.900 | |
| SRR5643515 | five period of Gastrodia elata | 9.230 | |
| SRR5643524 | five period of Gastrodia elata | 10.090 | |
| SRR5643525 | five period of Gastrodia elata | 7.400 | |
| SRR5643528 | five period of Gastrodia elata | 6.910 | |
| SRR5643658 | five period of Gastrodia elata | 9.580 | |
| SRR5643659 | five period of Gastrodia elata | 9.320 | |
| SRR5643660 | five period of Gastrodia elata | 7.540 | |
| SRR5643661 | five period of Gastrodia elata | 7.560 | |
| SRR5643662 | five period of Gastrodia elata | 7.590 | |
| SRR5643663 | five period of Gastrodia elata | 10.510 | |
| SRR5643664 | five period of Gastrodia elata | 7.240 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.550 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.360 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.710 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.110 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.530 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.280 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.51 |
| Juven | Juvenile tuber | 10.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.83 | |
| Mother_Juven | Mother tuber of Juvenile | 7.20 |