Gene detail

Detail information of GWHGAAEX009713/evm.TU.scaffold_255.7

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1304	4.00E-140	Amino acid transporters
nr	gi\|694995863\|ref\|XP_009390816.1\|	1.04E-156	PREDICTED: proton-coupled amino acid transporter 3-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9SS86\|LHTL4_ARATH	6.00E-12	Lysine histidine transporter-like 4
trEMBL	tr\|W5BAT3\|W5BAT3_WHEAT	5.00E-153	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Traes_2BL_68622D93C.1}
TAIR	AT4G38250	4.00E-140	Transmembrane amino acid transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000258	315672	331255	+

Transcript Sequence
>GWHTAAEX009713 TTCTTCTTCATGATCGATTGTCTCATCCACACCGGAAAAAGTGAATCGTGATCCCCTTCGGCCTCTTAGCACCATAATAAATCCTATTCGTAAGAGCGCTCGGCCGCCTATCAATGGGCTTTGAGAACGAGGCGAGCTCCTCTTACAAGTCCCTGCTCCAAAGCGAGGCAAGCTCACATCTCAACTCCCCCAAGCTATCATCCCAGCCTAAAACCTTCGCTAATATATTCATCGCCATAGTCGGGGCCGGCGTGCTTGGTCTTCCCTACGCCTTCAAGCGCACAGGATGGGCCGCCGGAACCCTAATAATCCTCTTCGTCGGAACCCTAACCTACCACTGCATGATGCTCATCTCCCGCACCCGCCTCCGGCTCCTCCTCCTACCCTACCGCATGGATCCCTCCCAAATATCCTCTTTTGGGGACATCGGTCTCGCAGTTGCTGGTCAGGCTGGCCGCCTCGCCGTCGACGCCTTAATTGTTCTAAGCCATTCTGGGTATTGTGTCGGATACCTCATCTTCATCTCCAACGTCCTCTCGCTTCTGCTGCCCTACCCTAAATCGCTCTACATTCTTGCGATCTTGCCTTTCCAGATCGCTCTCAATTCCGTCTGCAGCCTCACCCTGCTGGCGCCGCTGAGCATCTTCGCGGATGTCATTGATTTTGCGGCCATGGCGGTGGTTCTCCGGGAGGATTTTGTGGCCGGGAGGTTGGACCGGACCCATCTGGTCTGGTTCGGTGAACCGGCGGAGATTTTGTACGGGTTCGGGGTGGCGGTCTTTTCGTTCGAGGTGATGGGGATGGTTCTGCCGCTGGAATCGGAGGCGGCCGATAAGGAAAGGTTTGGGCGGACGCTGGGGCTGTCGGTGGGGGTGATATCGCTCGTCTATGCGGCGTTTGGGGCGTTTGGGTACGCCGCGTTTGGGGATGCCACGCGGGATGTTATAACCTCGAATCTGGGCCGTGGCAAGGTGGCTGTTGTGGTGCAGGTGGGCCTCTGCATCAACCTCTTCTTCACATTTCCGGTAATGATGAATCCGGTGTACGAAGTGGGGGAGCGGTTGATATGCGGCAAGCGATATTGCCTTTGGCTGCGGTGGGCTGCGGTTGGCGCGGTGAGCGCTGTGGCGCTTCTCGCGCCCAGCTTCACCGACTTCCTGTCCCTCGTCGGCGGCACTGTCTGTAGCCTTCTCGGCTTCGTCTTGCCTCCATCCTTCCATCTCAGGGTTTTCGGCCCGGAGATGGGCCCTCTAGCTGTGGCCGCTGATGTGGCCATCATTCTCTTTGGACTCGCCGTTGCGGTTTCTGCCATCTGTTCTTCCCTCCTGGCTATTTTTGGCCCCTGATGTCAGCTCCCGGTCTTTTAATTCTACGGCTGAAGGGTATTGCTTTTCTTTATTGATAATAGATTACAAAATAGATTATTCAAAGAGCCTTCGATCAGTGTATATTATATATGAGAAATTTTGAATGTATATTTAAGAATTCTATTCAATGAGTCATACACTGCTCATAGCATTAGCCTTATATATATATATAGATAATAAGGACAAGGAAAATTGCTGGTTCGGTGAAAATGAGATATTCTTGAAGCTTCT

Network for GWHGAAEX009713

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01490.17	Aa_trans	29	400	4.80E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14209	SLC36A, PAT	Autophagy - yeast	map04138
K14209	SLC36A, PAT	Protein digestion and absorption	map04974

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.100
SRP064423	SRR2545915	Juvenile tuber	4.100
SRP108465	SRR5643513	five period of Gastrodia elata	6.570
	SRR5643514	five period of Gastrodia elata	6.500
	SRR5643515	five period of Gastrodia elata	6.980
	SRR5643524	five period of Gastrodia elata	7.810
	SRR5643525	five period of Gastrodia elata	12.340
	SRR5643528	five period of Gastrodia elata	11.810
	SRR5643658	five period of Gastrodia elata	15.040
	SRR5643659	five period of Gastrodia elata	7.500
	SRR5643660	five period of Gastrodia elata	8.020
	SRR5643661	five period of Gastrodia elata	7.430
	SRR5643662	five period of Gastrodia elata	10.320
	SRR5643663	five period of Gastrodia elata	9.400
	SRR5643664	five period of Gastrodia elata	8.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.660
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.610
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.100
SRP279888	Gastro	Gastrodia elata tuber	4.75
	Juven	Juvenile tuber	3.95
	Mother_Gastro	Mother tuber of Gastrodia elata	6.77
	Mother_Juven	Mother tuber of Juvenile	5.27