Detail information of GWHGAAEX009721/evm.TU.scaffold_255.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672188649|ref|XP_008813634.1|7.64E-119PREDICTED: NAC transcription factor 25-like [Phoenix dactylifera]
Swissprottr|Q9FIW5|NAC94_ARATH1.00E-54Putative NAC domain-containing protein 94
trEMBLtr|M0RNG2|M0RNG2_MUSAM3.00E-117Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P01320_001}
TAIRAT2G170406.00E-83NAC domain containing protein 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000258518953520832+
Transcript Sequence

Network for GWHGAAEX009721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM111373.00E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.120
SRR2545915Juvenile tuber10.190
SRP108465SRR5643513five period of Gastrodia elata17.340
SRR5643514five period of Gastrodia elata24.470
SRR5643515five period of Gastrodia elata16.990
SRR5643524five period of Gastrodia elata16.120
SRR5643525five period of Gastrodia elata0.270
SRR5643528five period of Gastrodia elata0.670
SRR5643658five period of Gastrodia elata0.550
SRR5643659five period of Gastrodia elata52.440
SRR5643660five period of Gastrodia elata60.400
SRR5643661five period of Gastrodia elata68.420
SRR5643662five period of Gastrodia elata26.890
SRR5643663five period of Gastrodia elata24.400
SRR5643664five period of Gastrodia elata38.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.660
SRR6049655Rhizomagastrodiae_C368-T10_good_129.590
SRR6049656Rhizomagastrodiae_C368-T07_good_136.830
SRR6049657Rhizomagastrodiae_C368-T07_good_126.900
SRR6049658Rhizomagastrodiae_C368-T04_good_136.670
SRR6049659Rhizomagastrodiae_C368-T04_good_129.420
SRR6049660Rhizomagastrodiae_C368-T01_good_127.250
SRR6049661Rhizomagastrodiae_C368-T04_good_119.610
SRR6049662Rhizomagastrodiae_C368-T01_good_128.350
SRR6049663Rhizomagastrodiae_C368-T01_good_145.150
SRR6049664Rhizomagastrodiae_C368-T10_good_157.160
SRR6049665Rhizomagastrodiae_C368-T10_good_157.160
SRP279888GastroGastrodia elata tuber 60.32
JuvenJuvenile tuber9.21
Mother_GastroMother tuber of Gastrodia elata 15.01
Mother_JuvenMother tuber of Juvenile 5.68