Detail information of GWHGAAEX009723/evm.TU.scaffold_255.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83647364|ref|YP_435799.1|8.00E-27FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396]
KOGKOG47300D-arabinono-1, 4-lactone oxidase
nrgi|590720859|ref|XP_007051445.1|0D-arabinono-1,4-lactone oxidase family protein [Theobroma cacao]
trEMBLtr|A0A061DT84|A0A061DT84_THECC0D-arabinono-1,4-lactone oxidase family protein {ECO:0000313|EMBL:EOX95602.1}
TAIRAT2G467600D-arabinono-1,4-lactone oxidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000258525235528304-
Transcript Sequence

Network for GWHGAAEX009723

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01565.22FAD_binding_4631942.70E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00103GULO Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0071949Molecular FunctionFAD binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.100
SRR2545915Juvenile tuber1.000
SRP108465SRR5643513five period of Gastrodia elata41.690
SRR5643514five period of Gastrodia elata5.080
SRR5643515five period of Gastrodia elata12.530
SRR5643524five period of Gastrodia elata4.380
SRR5643525five period of Gastrodia elata3.110
SRR5643528five period of Gastrodia elata0.990
SRR5643658five period of Gastrodia elata4.140
SRR5643659five period of Gastrodia elata2.090
SRR5643660five period of Gastrodia elata0.440
SRR5643661five period of Gastrodia elata0.490
SRR5643662five period of Gastrodia elata0.290
SRR5643663five period of Gastrodia elata0.560
SRR5643664five period of Gastrodia elata0.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.610
SRR6049655Rhizomagastrodiae_C368-T10_good_179.190
SRR6049656Rhizomagastrodiae_C368-T07_good_1188.900
SRR6049657Rhizomagastrodiae_C368-T07_good_146.830
SRR6049658Rhizomagastrodiae_C368-T04_good_185.810
SRR6049659Rhizomagastrodiae_C368-T04_good_171.560
SRR6049660Rhizomagastrodiae_C368-T01_good_119.680
SRR6049661Rhizomagastrodiae_C368-T04_good_144.100
SRR6049662Rhizomagastrodiae_C368-T01_good_144.990
SRR6049663Rhizomagastrodiae_C368-T01_good_139.650
SRR6049664Rhizomagastrodiae_C368-T10_good_1291.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1291.030
SRP279888GastroGastrodia elata tuber 1.80
JuvenJuvenile tuber1.69
Mother_GastroMother tuber of Gastrodia elata 0.33
Mother_JuvenMother tuber of Juvenile 0.43