Detail information of GWHGAAEX009724/evm.TU.scaffold_255.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83647364|ref|YP_435799.1|6.00E-41FAD/FMN-containing dehydrogenase [Hahella chejuensis KCTC 2396]
KOGKOG47300D-arabinono-1, 4-lactone oxidase
nrgi|590720859|ref|XP_007051445.1|0D-arabinono-1,4-lactone oxidase family protein [Theobroma cacao]
trEMBLtr|A0A061DT84|A0A061DT84_THECC0D-arabinono-1,4-lactone oxidase family protein {ECO:0000313|EMBL:EOX95602.1}
TAIRAT2G467600D-arabinono-1,4-lactone oxidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000258560908571294-
Transcript Sequence

Network for GWHGAAEX009724

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01565.22FAD_binding_4631941.70E-18
PF04030.13ALO3735052.20E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00103GULO Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0003885Molecular FunctionD-arabinono-1,4-lactone oxidase activity
GO:0071949Molecular FunctionFAD binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.250
SRR2545915Juvenile tuber1.410
SRP108465SRR5643513five period of Gastrodia elata2.630
SRR5643514five period of Gastrodia elata2.140
SRR5643515five period of Gastrodia elata0.710
SRR5643524five period of Gastrodia elata2.220
SRR5643525five period of Gastrodia elata0.050
SRR5643528five period of Gastrodia elata0.100
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.590
SRR5643660five period of Gastrodia elata1.240
SRR5643661five period of Gastrodia elata1.130
SRR5643662five period of Gastrodia elata0.770
SRR5643663five period of Gastrodia elata0.850
SRR5643664five period of Gastrodia elata0.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.030
SRR6049655Rhizomagastrodiae_C368-T10_good_16.510
SRR6049656Rhizomagastrodiae_C368-T07_good_116.120
SRR6049657Rhizomagastrodiae_C368-T07_good_112.850
SRR6049658Rhizomagastrodiae_C368-T04_good_111.860
SRR6049659Rhizomagastrodiae_C368-T04_good_112.390
SRR6049660Rhizomagastrodiae_C368-T01_good_114.980
SRR6049661Rhizomagastrodiae_C368-T04_good_123.220
SRR6049662Rhizomagastrodiae_C368-T01_good_118.070
SRR6049663Rhizomagastrodiae_C368-T01_good_19.440
SRR6049664Rhizomagastrodiae_C368-T10_good_14.670
SRR6049665Rhizomagastrodiae_C368-T10_good_14.670
SRP279888GastroGastrodia elata tuber 20.46
JuvenJuvenile tuber5.73
Mother_GastroMother tuber of Gastrodia elata 1.56
Mother_JuvenMother tuber of Juvenile 2.10