Detail information of GWHGAAEX009738/evm.TU.scaffold_257.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743837449|ref|XP_010936409.1|2.40E-48PREDICTED: formin-A-like [Elaeis guineensis]
trEMBLtr|W5BLP0|W5BLP0_WHEAT4.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_2BS_86E55DCC8.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000272142234143413-
Transcript Sequence

Network for GWHGAAEX009738

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA11611.20E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.490
SRR2545915Juvenile tuber1.900
SRP108465SRR5643513five period of Gastrodia elata32.060
SRR5643514five period of Gastrodia elata91.620
SRR5643515five period of Gastrodia elata48.400
SRR5643524five period of Gastrodia elata71.030
SRR5643525five period of Gastrodia elata193.330
SRR5643528five period of Gastrodia elata161.750
SRR5643658five period of Gastrodia elata220.510
SRR5643659five period of Gastrodia elata8.150
SRR5643660five period of Gastrodia elata10.580
SRR5643661five period of Gastrodia elata10.920
SRR5643662five period of Gastrodia elata21.730
SRR5643663five period of Gastrodia elata19.460
SRR5643664five period of Gastrodia elata41.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.450
SRR6049655Rhizomagastrodiae_C368-T10_good_142.540
SRR6049656Rhizomagastrodiae_C368-T07_good_133.650
SRR6049657Rhizomagastrodiae_C368-T07_good_114.220
SRR6049658Rhizomagastrodiae_C368-T04_good_127.850
SRR6049659Rhizomagastrodiae_C368-T04_good_122.650
SRR6049660Rhizomagastrodiae_C368-T01_good_116.360
SRR6049661Rhizomagastrodiae_C368-T04_good_111.800
SRR6049662Rhizomagastrodiae_C368-T01_good_174.430
SRR6049663Rhizomagastrodiae_C368-T01_good_181.440
SRR6049664Rhizomagastrodiae_C368-T10_good_152.700
SRR6049665Rhizomagastrodiae_C368-T10_good_152.700
SRP279888GastroGastrodia elata tuber 18.79
JuvenJuvenile tuber1.14
Mother_GastroMother tuber of Gastrodia elata 73.25
Mother_JuvenMother tuber of Juvenile 59.96