Detail information of GWHGAAEX009754/evm.TU.scaffold_257.31
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428778277|ref|YP_007170064.1| | 3.00E-26 | major facilitator superfamily protein [Halothece sp. PCC 7418] |
| KOG | KOG0637 | 0 | Sucrose transporter and related proteins |
| nr | gi|720049748|ref|XP_010271544.1| | 0 | PREDICTED: sucrose transport protein SUC4 [Nelumbo nucifera] |
| Swissprot | tr|A2ZN77|SUT2_ORYSI | 0 | Sucrose transport protein SUT2 |
| trEMBL | tr|W5U4K7|W5U4K7_THECC | 0 | Sucrose transporter 4 {ECO:0000313|EMBL:AHH34927.1} |
| TAIR | AT1G09960 | 0 | sucrose transporter 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000272 | 332881 | 360273 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009754
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07690.15 | MFS_1 | 135 | 538 | 3.60E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015770 | Biological Process | sucrose transport |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0008515 | Molecular Function | sucrose transmembrane transporter activity |
| GO:0005887 | Cellular Component | integral component of plasma membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 32.590 |
| SRR2545915 | Juvenile tuber | 30.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 46.600 |
| SRR5643514 | five period of Gastrodia elata | 39.910 | |
| SRR5643515 | five period of Gastrodia elata | 38.740 | |
| SRR5643524 | five period of Gastrodia elata | 40.240 | |
| SRR5643525 | five period of Gastrodia elata | 55.210 | |
| SRR5643528 | five period of Gastrodia elata | 45.630 | |
| SRR5643658 | five period of Gastrodia elata | 54.070 | |
| SRR5643659 | five period of Gastrodia elata | 41.500 | |
| SRR5643660 | five period of Gastrodia elata | 39.470 | |
| SRR5643661 | five period of Gastrodia elata | 34.650 | |
| SRR5643662 | five period of Gastrodia elata | 31.310 | |
| SRR5643663 | five period of Gastrodia elata | 41.150 | |
| SRR5643664 | five period of Gastrodia elata | 38.120 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 46.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 40.240 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 48.580 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 41.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 44.080 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 42.180 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 40.630 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 37.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 36.640 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.450 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.450 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 30.14 |
| Juven | Juvenile tuber | 49.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 33.13 | |
| Mother_Juven | Mother tuber of Juvenile | 35.25 |