Detail information of GWHGAAEX009768/evm.TU.scaffold_258.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|145301025|ref|YP_001143866.1|3.00E-113Zn-dependent alcohol dehydrogenase class III [Aeromonas salmonicida subsp. salmonicida A449]
KOGKOG00222.00E-171Alcohol dehydrogenase, class III
nrgi|743870494|ref|XP_010906060.1|0PREDICTED: alcohol dehydrogenase-like 3 [Elaeis guineensis]
Swissprottr|Q8VZ49|ADHL4_ARATH6.00E-172Alcohol dehydrogenase-like 4
trEMBLtr|M0ST64|M0ST64_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P29520_001}
TAIRAT1G647102.00E-171GroES-like zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000259109124114018-
Transcript Sequence

Network for GWHGAAEX009768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N511498.70E-25
PF00107.25ADH_zinc_N2263501.00E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00001E1.1.1.1, adh Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0008270Molecular Functionzinc ion binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.820
SRR2545915Juvenile tuber57.990
SRP108465SRR5643513five period of Gastrodia elata126.390
SRR5643514five period of Gastrodia elata95.860
SRR5643515five period of Gastrodia elata104.450
SRR5643524five period of Gastrodia elata129.260
SRR5643525five period of Gastrodia elata3.020
SRR5643528five period of Gastrodia elata1.110
SRR5643658five period of Gastrodia elata0.960
SRR5643659five period of Gastrodia elata68.340
SRR5643660five period of Gastrodia elata65.540
SRR5643661five period of Gastrodia elata120.380
SRR5643662five period of Gastrodia elata41.230
SRR5643663five period of Gastrodia elata22.770
SRR5643664five period of Gastrodia elata22.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_194.980
SRR6049655Rhizomagastrodiae_C368-T10_good_187.260
SRR6049656Rhizomagastrodiae_C368-T07_good_1128.640
SRR6049657Rhizomagastrodiae_C368-T07_good_199.450
SRR6049658Rhizomagastrodiae_C368-T04_good_172.220
SRR6049659Rhizomagastrodiae_C368-T04_good_156.580
SRR6049660Rhizomagastrodiae_C368-T01_good_187.860
SRR6049661Rhizomagastrodiae_C368-T04_good_1112.290
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.590
SRR6049663Rhizomagastrodiae_C368-T01_good_186.100
SRR6049664Rhizomagastrodiae_C368-T10_good_1147.440
SRR6049665Rhizomagastrodiae_C368-T10_good_1147.440
SRP279888GastroGastrodia elata tuber 41.82
JuvenJuvenile tuber186.43
Mother_GastroMother tuber of Gastrodia elata 47.40
Mother_JuvenMother tuber of Juvenile 77.49