Detail information of GWHGAAEX009769/evm.TU.scaffold_258.9
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434386972|ref|YP_007097583.1| | 5.00E-24 | putative iron-regulated protein [Chamaesiphon minutus PCC 6605] |
| nr | gi|719999007|ref|XP_010255579.1| | 8.58E-109 | PREDICTED: uncharacterized protein LOC104596209 [Nelumbo nucifera] |
| trEMBL | tr|C5X0Y8|C5X0Y8_SORBI | 4.00E-107 | Putative uncharacterized protein Sb01g049300 {ECO:0000313|EMBL:EER92976.1} |
| TAIR | AT5G51880 | 1.00E-89 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000259 | 141949 | 146023 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009769
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13640.5 | 2OG-FeII_Oxy_3 | 125 | 221 | 8.40E-08 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0031418 | Molecular Function | L-ascorbic acid binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 51.410 |
| SRR2545915 | Juvenile tuber | 47.990 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.700 |
| SRR5643514 | five period of Gastrodia elata | 33.390 | |
| SRR5643515 | five period of Gastrodia elata | 41.670 | |
| SRR5643524 | five period of Gastrodia elata | 34.090 | |
| SRR5643525 | five period of Gastrodia elata | 37.980 | |
| SRR5643528 | five period of Gastrodia elata | 37.310 | |
| SRR5643658 | five period of Gastrodia elata | 37.590 | |
| SRR5643659 | five period of Gastrodia elata | 38.640 | |
| SRR5643660 | five period of Gastrodia elata | 42.810 | |
| SRR5643661 | five period of Gastrodia elata | 41.890 | |
| SRR5643662 | five period of Gastrodia elata | 36.820 | |
| SRR5643663 | five period of Gastrodia elata | 36.200 | |
| SRR5643664 | five period of Gastrodia elata | 35.770 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 45.190 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 42.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 39.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 38.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 38.720 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 43.600 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 42.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 48.160 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 42.840 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 50.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 50.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 35.67 |
| Juven | Juvenile tuber | 43.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 30.22 | |
| Mother_Juven | Mother tuber of Juvenile | 29.73 |