Detail information of GWHGAAEX009774/evm.TU.scaffold_258.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672189474|ref|XP_008775003.1|2.67E-147PREDICTED: expansin-A10 [Phoenix dactylifera]
Swissprottr|Q7XUD0|EXP10_ORYSJ6.00E-134Expansin-A10 (Precursor)
trEMBLtr|M0U7D1|M0U7D1_MUSAM6.00E-146Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP08200_001}
TAIRAT3G032203.00E-117expansin A13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000259203249204217+
Transcript Sequence

Network for GWHGAAEX009774

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1781631.20E-17
PF01357.20Pollen_allerg_11742512.50E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009664Biological Processplant-type cell wall organization
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.370
SRR2545915Juvenile tuber6.050
SRP108465SRR5643513five period of Gastrodia elata23.240
SRR5643514five period of Gastrodia elata22.170
SRR5643515five period of Gastrodia elata22.650
SRR5643524five period of Gastrodia elata18.220
SRR5643525five period of Gastrodia elata7.040
SRR5643528five period of Gastrodia elata7.440
SRR5643658five period of Gastrodia elata5.610
SRR5643659five period of Gastrodia elata30.650
SRR5643660five period of Gastrodia elata18.120
SRR5643661five period of Gastrodia elata25.240
SRR5643662five period of Gastrodia elata15.310
SRR5643663five period of Gastrodia elata22.540
SRR5643664five period of Gastrodia elata34.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.050
SRR6049655Rhizomagastrodiae_C368-T10_good_130.680
SRR6049656Rhizomagastrodiae_C368-T07_good_135.810
SRR6049657Rhizomagastrodiae_C368-T07_good_127.810
SRR6049658Rhizomagastrodiae_C368-T04_good_124.710
SRR6049659Rhizomagastrodiae_C368-T04_good_117.870
SRR6049660Rhizomagastrodiae_C368-T01_good_142.400
SRR6049661Rhizomagastrodiae_C368-T04_good_130.550
SRR6049662Rhizomagastrodiae_C368-T01_good_153.060
SRR6049663Rhizomagastrodiae_C368-T01_good_151.730
SRR6049664Rhizomagastrodiae_C368-T10_good_131.260
SRR6049665Rhizomagastrodiae_C368-T10_good_131.260
SRP279888GastroGastrodia elata tuber 11.48
JuvenJuvenile tuber20.05
Mother_GastroMother tuber of Gastrodia elata 2.42
Mother_JuvenMother tuber of Juvenile 3.47