Detail information of GWHGAAEX009784/evm.TU.scaffold_258.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743779580|ref|XP_010920260.1|2.34E-166PREDICTED: uncharacterized protein LOC105044153 isoform X1 [Elaeis guineensis]
trEMBLtr|M0SVI5|M0SVI5_MUSAM2.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P04060_001}
TAIRAT4G388102.00E-142Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000259236045245315+
Transcript Sequence

Network for GWHGAAEX009784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.940
SRR2545915Juvenile tuber28.910
SRP108465SRR5643513five period of Gastrodia elata23.890
SRR5643514five period of Gastrodia elata25.150
SRR5643515five period of Gastrodia elata24.630
SRR5643524five period of Gastrodia elata26.380
SRR5643525five period of Gastrodia elata44.690
SRR5643528five period of Gastrodia elata36.830
SRR5643658five period of Gastrodia elata29.150
SRR5643659five period of Gastrodia elata25.480
SRR5643660five period of Gastrodia elata28.890
SRR5643661five period of Gastrodia elata24.990
SRR5643662five period of Gastrodia elata26.740
SRR5643663five period of Gastrodia elata30.350
SRR5643664five period of Gastrodia elata28.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.360
SRR6049655Rhizomagastrodiae_C368-T10_good_113.020
SRR6049656Rhizomagastrodiae_C368-T07_good_130.390
SRR6049657Rhizomagastrodiae_C368-T07_good_118.970
SRR6049658Rhizomagastrodiae_C368-T04_good_125.500
SRR6049659Rhizomagastrodiae_C368-T04_good_124.480
SRR6049660Rhizomagastrodiae_C368-T01_good_120.520
SRR6049661Rhizomagastrodiae_C368-T04_good_131.920
SRR6049662Rhizomagastrodiae_C368-T01_good_125.780
SRR6049663Rhizomagastrodiae_C368-T01_good_122.070
SRR6049664Rhizomagastrodiae_C368-T10_good_120.790
SRR6049665Rhizomagastrodiae_C368-T10_good_120.790
SRP279888GastroGastrodia elata tuber 54.40
JuvenJuvenile tuber28.62
Mother_GastroMother tuber of Gastrodia elata 28.40
Mother_JuvenMother tuber of Juvenile 42.54