Detail information of GWHGAAEX009792/evm.TU.scaffold_258.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297622977|ref|YP_003704411.1|3.00E-53sulfate adenylyltransferase [Truepera radiovictrix DSM 17093]
KOGKOG06360ATP sulfurylase (sulfate adenylyltransferase)
nrgi|731362117|ref|XP_010692725.1|0PREDICTED: ATP sulfurylase 2 [Beta vulgaris subsp. vulgaris]
Swissprottr|Q43870|APS2_ARATH0ATP sulfurylase 2 (Precursor)
trEMBLtr|G7ZV13|G7ZV13_MEDTR0Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase {ECO:0000313|EMBL:AES83051.1}
TAIRAT1G199200Pseudouridine synthase/archaeosine transglycosylase-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000259475856481618+
Transcript Sequence

Network for GWHGAAEX009792

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14306.5PUA_2221842.70E-45
PF01747.16ATP-sulfurylase1944159.40E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13811PAPSS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Sulfur metabolismmap00920
Purine metabolismmap00230
Selenocompound metabolismmap00450
Monobactam biosynthesismap00261

Gene Ontology

GO term OntologyName
GO:0000103Biological Processsulfate assimilation
GO:0004781Molecular Functionsulfate adenylyltransferase (ATP) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.210
SRR2545915Juvenile tuber26.860
SRP108465SRR5643513five period of Gastrodia elata22.130
SRR5643514five period of Gastrodia elata13.050
SRR5643515five period of Gastrodia elata18.530
SRR5643524five period of Gastrodia elata14.710
SRR5643525five period of Gastrodia elata10.740
SRR5643528five period of Gastrodia elata13.280
SRR5643658five period of Gastrodia elata9.800
SRR5643659five period of Gastrodia elata29.560
SRR5643660five period of Gastrodia elata30.330
SRR5643661five period of Gastrodia elata37.040
SRR5643662five period of Gastrodia elata49.480
SRR5643663five period of Gastrodia elata31.430
SRR5643664five period of Gastrodia elata36.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.500
SRR6049655Rhizomagastrodiae_C368-T10_good_123.030
SRR6049656Rhizomagastrodiae_C368-T07_good_133.460
SRR6049657Rhizomagastrodiae_C368-T07_good_134.910
SRR6049658Rhizomagastrodiae_C368-T04_good_139.170
SRR6049659Rhizomagastrodiae_C368-T04_good_140.960
SRR6049660Rhizomagastrodiae_C368-T01_good_135.640
SRR6049661Rhizomagastrodiae_C368-T04_good_136.690
SRR6049662Rhizomagastrodiae_C368-T01_good_125.940
SRR6049663Rhizomagastrodiae_C368-T01_good_128.350
SRR6049664Rhizomagastrodiae_C368-T10_good_128.080
SRR6049665Rhizomagastrodiae_C368-T10_good_128.080
SRP279888GastroGastrodia elata tuber 37.72
JuvenJuvenile tuber19.25
Mother_GastroMother tuber of Gastrodia elata 21.99
Mother_JuvenMother tuber of Juvenile 15.62