Detail information of GWHGAAEX009798/evm.TU.scaffold_258.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04120Golgi transport complex COD1 protein
nrgi|743829621|ref|XP_010934198.1|0PREDICTED: conserved oligomeric Golgi complex subunit 4 [Elaeis guineensis]
Swissprottr|Q8L838|COG4_ARATH0Conserved oligomeric Golgi complex subunit 4
trEMBLtr|F6I2Y2|F6I2Y2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB61299.1}
TAIRAT4G01400_20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000259590521607361-
Transcript Sequence

Network for GWHGAAEX009798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08318.11COG41935018.90E-72
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.630
SRR2545915Juvenile tuber8.000
SRP108465SRR5643513five period of Gastrodia elata18.790
SRR5643514five period of Gastrodia elata15.600
SRR5643515five period of Gastrodia elata20.760
SRR5643524five period of Gastrodia elata16.760
SRR5643525five period of Gastrodia elata16.630
SRR5643528five period of Gastrodia elata19.750
SRR5643658five period of Gastrodia elata15.060
SRR5643659five period of Gastrodia elata21.970
SRR5643660five period of Gastrodia elata21.090
SRR5643661five period of Gastrodia elata26.450
SRR5643662five period of Gastrodia elata26.750
SRR5643663five period of Gastrodia elata23.030
SRR5643664five period of Gastrodia elata18.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.420
SRR6049655Rhizomagastrodiae_C368-T10_good_118.970
SRR6049656Rhizomagastrodiae_C368-T07_good_121.400
SRR6049657Rhizomagastrodiae_C368-T07_good_116.420
SRR6049658Rhizomagastrodiae_C368-T04_good_114.960
SRR6049659Rhizomagastrodiae_C368-T04_good_112.440
SRR6049660Rhizomagastrodiae_C368-T01_good_116.580
SRR6049661Rhizomagastrodiae_C368-T04_good_117.130
SRR6049662Rhizomagastrodiae_C368-T01_good_128.330
SRR6049663Rhizomagastrodiae_C368-T01_good_124.850
SRR6049664Rhizomagastrodiae_C368-T10_good_125.590
SRR6049665Rhizomagastrodiae_C368-T10_good_125.590
SRP279888GastroGastrodia elata tuber 16.85
JuvenJuvenile tuber12.20
Mother_GastroMother tuber of Gastrodia elata 19.97
Mother_JuvenMother tuber of Juvenile 18.62