Detail information of GWHGAAEX009803/evm.TU.scaffold_259.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262197430|ref|YP_003268639.1|1.00E-19acireductone dioxygenase [Haliangium ochraceum DSM 14365]
KOGKOG21073.00E-97Uncharacterized conserved protein, contains double-stranded beta-helix domain
nrgi|61807497|gb|AAX55895.1|1.91E-115aci-reductone dioxygenase-like protein [Oryza sativa Japonica Group]
Swissprottr|Q10RE5|MTND2_ORYSJ3.00E-1171,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 {ECO:0000255|HAMAP-Rule:MF_03154}
trEMBLtr|B8ANV9|B8ANV9_ORYSI2.00E-1151,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_03154}
TAIRAT2G264003.00E-97acireductone dioxygenase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000255413188443739+
Transcript Sequence

Network for GWHGAAEX009803

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03079.13ARD141686.30E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08967mtnD, mtnZ, ADI1 Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0019509Biological ProcessL-methionine biosynthetic process from methylthioadenosine
GO:0010309Molecular Functionacireductone dioxygenase [iron(II)-requiring] activity
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms126.960
SRR2545915Juvenile tuber142.640
SRP108465SRR5643513five period of Gastrodia elata447.430
SRR5643514five period of Gastrodia elata824.020
SRR5643515five period of Gastrodia elata661.600
SRR5643524five period of Gastrodia elata850.490
SRR5643525five period of Gastrodia elata626.590
SRR5643528five period of Gastrodia elata607.780
SRR5643658five period of Gastrodia elata548.480
SRR5643659five period of Gastrodia elata151.630
SRR5643660five period of Gastrodia elata160.750
SRR5643661five period of Gastrodia elata163.920
SRR5643662five period of Gastrodia elata180.000
SRR5643663five period of Gastrodia elata171.520
SRR5643664five period of Gastrodia elata181.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1493.180
SRR6049655Rhizomagastrodiae_C368-T10_good_1867.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1521.200
SRR6049657Rhizomagastrodiae_C368-T07_good_1247.280
SRR6049658Rhizomagastrodiae_C368-T04_good_1367.510
SRR6049659Rhizomagastrodiae_C368-T04_good_1346.870
SRR6049660Rhizomagastrodiae_C368-T01_good_1204.060
SRR6049661Rhizomagastrodiae_C368-T04_good_1282.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1618.190
SRR6049663Rhizomagastrodiae_C368-T01_good_1458.630
SRR6049664Rhizomagastrodiae_C368-T10_good_11204.930
SRR6049665Rhizomagastrodiae_C368-T10_good_11204.930
SRP279888GastroGastrodia elata tuber 212.77
JuvenJuvenile tuber302.06
Mother_GastroMother tuber of Gastrodia elata 414.27
Mother_JuvenMother tuber of Juvenile 473.33