Detail information of GWHGAAEX009807/evm.TU.scaffold_26.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|29376354|ref|NP_815508.1| | 6.00E-09 | general stress protein A [Enterococcus faecalis V583] |
| nr | gi|743789136|ref|XP_010922847.1| | 0 | PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q9ZVI7|GAUT7_ARATH | 2.00E-174 | Probable galacturonosyltransferase 7 |
| trEMBL | tr|K3Z4J8|K3Z4J8_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si021466m} |
| TAIR | AT2G38650 | 4.00E-171 | galacturonosyltransferase 7 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000029 | 98268 | 108061 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX009807
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01501.19 | Glyco_transf_8 | 303 | 579 | 7.20E-42 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13648 | GAUT | Metabolic pathways | map01100 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.700 |
| SRR2545915 | Juvenile tuber | 7.400 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.620 |
| SRR5643514 | five period of Gastrodia elata | 7.700 | |
| SRR5643515 | five period of Gastrodia elata | 7.420 | |
| SRR5643524 | five period of Gastrodia elata | 7.420 | |
| SRR5643525 | five period of Gastrodia elata | 12.260 | |
| SRR5643528 | five period of Gastrodia elata | 7.270 | |
| SRR5643658 | five period of Gastrodia elata | 6.530 | |
| SRR5643659 | five period of Gastrodia elata | 5.540 | |
| SRR5643660 | five period of Gastrodia elata | 5.050 | |
| SRR5643661 | five period of Gastrodia elata | 4.330 | |
| SRR5643662 | five period of Gastrodia elata | 4.970 | |
| SRR5643663 | five period of Gastrodia elata | 4.610 | |
| SRR5643664 | five period of Gastrodia elata | 9.100 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.640 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.360 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.600 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.990 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.160 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.720 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.720 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.96 |
| Juven | Juvenile tuber | 4.27 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.88 | |
| Mother_Juven | Mother tuber of Juvenile | 8.19 |