Detail information of GWHGAAEX009817/evm.TU.scaffold_26.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|441037987|gb|AGC27311.1|2.09E-102NAC domain protein 8 [Gossypium hirsutum]
Swissprottr|Q9FLJ2|NC100_ARATH1.00E-86NAC domain-containing protein 100
trEMBLtr|U5IJP4|U5IJP4_GOSHI8.00E-103NAC domain protein 8 {ECO:0000313|EMBL:AGC27311.1}
TAIRAT5G182701.00E-97Arabidopsis NAC domain containing protein 87

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000029465559468195+
Transcript Sequence

Network for GWHGAAEX009817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM91351.30E-38
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.670
SRR2545915Juvenile tuber35.310
SRP108465SRR5643513five period of Gastrodia elata50.250
SRR5643514five period of Gastrodia elata33.810
SRR5643515five period of Gastrodia elata80.320
SRR5643524five period of Gastrodia elata55.000
SRR5643525five period of Gastrodia elata114.240
SRR5643528five period of Gastrodia elata152.760
SRR5643658five period of Gastrodia elata83.070
SRR5643659five period of Gastrodia elata15.760
SRR5643660five period of Gastrodia elata7.210
SRR5643661five period of Gastrodia elata14.570
SRR5643662five period of Gastrodia elata34.830
SRR5643663five period of Gastrodia elata13.250
SRR5643664five period of Gastrodia elata78.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.170
SRR6049655Rhizomagastrodiae_C368-T10_good_145.460
SRR6049656Rhizomagastrodiae_C368-T07_good_142.510
SRR6049657Rhizomagastrodiae_C368-T07_good_162.070
SRR6049658Rhizomagastrodiae_C368-T04_good_150.970
SRR6049659Rhizomagastrodiae_C368-T04_good_175.610
SRR6049660Rhizomagastrodiae_C368-T01_good_157.410
SRR6049661Rhizomagastrodiae_C368-T04_good_171.340
SRR6049662Rhizomagastrodiae_C368-T01_good_132.320
SRR6049663Rhizomagastrodiae_C368-T01_good_149.950
SRR6049664Rhizomagastrodiae_C368-T10_good_132.490
SRR6049665Rhizomagastrodiae_C368-T10_good_132.490
SRP279888GastroGastrodia elata tuber 31.38
JuvenJuvenile tuber8.18
Mother_GastroMother tuber of Gastrodia elata 1,099.11
Mother_JuvenMother tuber of Juvenile 515.02