Detail information of GWHGAAEX009818/evm.TU.scaffold_26.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672150293|ref|XP_008797329.1|0PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Phoenix dactylifera]
Swissprottr|Q8RWM3|MED27_ARATH2.00E-146Mediator of RNA polymerase II transcription subunit 27
trEMBLtr|C5XGH5|C5XGH5_SORBI4.00E-168Putative uncharacterized protein Sb03g010270 {ECO:0000313|EMBL:EES00527.1}
TAIRAT3G091802.00E-109Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000029719728763590+
Transcript Sequence

Network for GWHGAAEX009818

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11571.7Med273244258.20E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15170MED27 Thyroid hormone signaling pathway map04919

Gene Ontology

GO term OntologyName
GO:0016592Cellular Componentmediator complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.710
SRR2545915Juvenile tuber7.680
SRP108465SRR5643513five period of Gastrodia elata8.100
SRR5643514five period of Gastrodia elata8.710
SRR5643515five period of Gastrodia elata11.190
SRR5643524five period of Gastrodia elata9.250
SRR5643525five period of Gastrodia elata8.980
SRR5643528five period of Gastrodia elata13.640
SRR5643658five period of Gastrodia elata10.260
SRR5643659five period of Gastrodia elata9.430
SRR5643660five period of Gastrodia elata9.370
SRR5643661five period of Gastrodia elata6.410
SRR5643662five period of Gastrodia elata6.660
SRR5643663five period of Gastrodia elata7.910
SRR5643664five period of Gastrodia elata7.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.280
SRR6049655Rhizomagastrodiae_C368-T10_good_16.090
SRR6049656Rhizomagastrodiae_C368-T07_good_19.530
SRR6049657Rhizomagastrodiae_C368-T07_good_18.280
SRR6049658Rhizomagastrodiae_C368-T04_good_18.910
SRR6049659Rhizomagastrodiae_C368-T04_good_18.820
SRR6049660Rhizomagastrodiae_C368-T01_good_18.720
SRR6049661Rhizomagastrodiae_C368-T04_good_18.580
SRR6049662Rhizomagastrodiae_C368-T01_good_19.740
SRR6049663Rhizomagastrodiae_C368-T01_good_19.460
SRR6049664Rhizomagastrodiae_C368-T10_good_19.750
SRR6049665Rhizomagastrodiae_C368-T10_good_19.750
SRP279888GastroGastrodia elata tuber 9.18
JuvenJuvenile tuber9.97
Mother_GastroMother tuber of Gastrodia elata 21.81
Mother_JuvenMother tuber of Juvenile 38.64